RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 CD72P21854 359 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 ADORA2BP29275 332 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 OR1D2P34982 312 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 NOS2P35228 1153 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 MATKP42679 507 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 STARD6P59095 220 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 KCNJ11Q14654 390 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 LPAL2Q16609 132 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF528Q3MIS6 628 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC45A4Q5BKX6 768 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 PPM1JQ5JR12 505 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 ZNF280DQ6N043 979 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 C1orf228Q6PIY5 440 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 TSSK4Q6SA08 328 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 TRPM8Q7Z2W7 1104 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 SPATA21Q7Z572 469 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 ZC3H18Q86VM9 953 aaKnown RBP13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 CCNJLQ8IV13 435 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 TRIM42Q8IWZ5 723 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 SCUBE3Q8IX30 993 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 LRRC8CQ8TDW0 803 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 KBTBD7Q8WVZ9 684 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 PWWP2AQ96N64 755 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 RPP25Q9BUL9 199 aaKnown RBP13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 TRIM62Q9BVG3 475 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 PITPNM3Q9BZ71 974 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 LRRC4Q9HBW1 653 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 XAB2Q9HCS7 855 aaKnown RBP13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC2A4RGQ9NR83 387 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 GMEB2Q9UKD1 530 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 FBXO4Q9UKT5 387 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 STARD13Q9Y3M8 1113 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 PCDHGA2Q9Y5H1 932 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 BACE2Q9Y5Z0 518 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 CDY1Q9Y6F8 540 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 FANCMQ8IYD8 2048 aa13.25□□□□□ -0.29
SMARCB1-203ENST00000407082 OR6C75A6NL08 312 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 GABRDO14764 452 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 TBC1D4O60343 1298 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 GRAP2O75791 330 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 MT-ND3P03897 115 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 PDGFRBP09619 1106 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 LCP1P13796 627 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 TPSB2P20231 275 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 CA4P22748 312 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 CYP2F1P24903 491 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 LMO2P25791 158 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 L1CAMP32004 1257 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 GDF10P55107 478 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 ARPP19P56211 112 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 HTR4Q13639 388 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 TPSAB1Q15661 275 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 KCTD19Q17RG1 926 aaPredicted RBP13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC25A52Q3SY17 297 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 SLC44A4Q53GD3 710 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 RSPO2Q6UXX9 243 aaPredicted RBP13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 PRUNE1Q86TP1 453 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 OSTM1Q86WC4 334 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 ANKMY2Q8IV38 441 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 CYP4X1Q8N118 509 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 FBF1Q8TES7 1133 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 ACBD6Q9BR61 282 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 DHRS4Q9BTZ2 278 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 DHX35Q9H5Z1 703 aaKnown RBP13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 USP29Q9HBJ7 922 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 RAB6BQ9NRW1 208 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 ZSCAN32Q9NX65 697 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 CTNNAL1Q9UBT7 734 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 RAB23Q9ULC3 237 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 AP4E1Q9UPM8 1137 aa13.24□□□□□ -0.29
SMARCB1-203ENST00000407082 BAHCC1Q9P281 2608 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ANHXE9PGG2 379 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 GOLGA8MH3BSY2 632 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ADAM12O43184 909 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ASMTLO95671 621 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 F9P00740 461 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PTPN1P18031 435 aaKnown RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 FSHRP23945 695 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 ACAT1P24752 427 aaKnown RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PCSK1P29120 753 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 SERPINB9P50453 376 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 HDAC4P56524 1084 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 GPX6P59796 221 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 SPEM2Q0P670 501 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 CCDC15Q0P6D6 951 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 LRRC14Q15048 493 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 TAF5Q15542 800 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 MLF2Q15773 248 aaPredicted RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 PDK4Q16654 411 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 FNBP1LQ5T0N5 605 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 UBAP2Q5T6F2 1119 aaKnown RBP13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 FYB2Q5VWT5 728 aa13.23□□□□□ -0.29
SMARCB1-203ENST00000407082 HEATR6Q6AI08 1181 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms