RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 C1orf74Q96LT6 269 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 MCEEQ96PE7 176 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 FEM1AQ9BSK4 669 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 SPON2Q9BUD6 331 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.64□□□□□ -0.71
FAM49A-202ENST00000406434 GPR174Q9BXC1 333 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 MAGEB5Q9BZ81 275 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 TSPY26PQ9H489 355 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 RXFP3Q9NSD7 469 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 VPS28Q9UK41 221 aa10.64□□□□□ -0.71
FAM49A-202ENST00000406434 CKAP5Q14008 2032 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 DRGXA6NNA5 263 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 PATE3B3GLJ2 98 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 FOXD2O60548 495 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 RNASEH1O60930 286 aaKnown RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 FTLP02792 175 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 DNTTP04053 509 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 SDHBP21912 280 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 MAOBP27338 520 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 OXTRP30559 389 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 OR1E1P30953 314 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 PI4KAP42356 2102 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 PLK1P53350 603 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 RPS14P62263 151 aaKnown RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 RPL7AP62424 266 aaKnown RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 IRX4P78413 519 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 PUM1Q14671 1186 aaKnown RBP eCLIP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 HNRNPA1L2Q32P51 320 aaKnown RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 C5orf22Q49AR2 442 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 SPDYCQ5MJ68 293 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 E4F1Q66K89 784 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 RWDD4Q6NW29 188 aaKnown RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 STRADAQ7RTN6 431 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 BNIPLQ7Z465 357 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 ZNF683Q8IZ20 524 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 RNF214Q8ND24 703 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 C3orf20Q8ND61 904 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 MYO19Q96H55 970 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 HSPA12BQ96MM6 686 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 WSB2Q9NYS7 404 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 USP36Q9P275 1121 aaKnown RBP10.63□□□□□ -0.71
FAM49A-202ENST00000406434 OR12D3Q9UGF7 316 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 SLC25A13Q9UJS0 675 aa10.63□□□□□ -0.71
FAM49A-202ENST00000406434 PLXND1Q9Y4D7 1925 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 EDDM13A0A1B0GTR0 161 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 TARSL2A2RTX5 802 aaKnown RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 DCDC2BA2VCK2 349 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 DDX3XO00571 662 aaKnown RBP eCLIP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 BNIP3LO60238 219 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 CFIP05156 583 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 PLEKP08567 350 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 VAV1P15498 845 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 DESP17661 470 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 PBX1P40424 430 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 PTPN9P43378 593 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 HDAC4P56524 1084 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 GSCP56915 257 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 NFKBIBQ15653 356 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 TDRD12Q587J7 1177 aaKnown RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 TRIM61Q5EBN2 209 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 FIGNQ5HY92 759 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 SYCP2LQ5T4T6 812 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 C9orf64Q5T6V5 341 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 ACBD5Q5T8D3 534 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 ZNF776Q68DI1 518 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 PPP1R2P3Q6NXS1 205 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 DGLUCYQ7Z3D6 616 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 SYT12Q8IV01 421 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 MMAAQ8IVH4 418 aaKnown RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 SLC41A1Q8IVJ1 513 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 DRC7Q8IY82 874 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 STK40Q8N2I9 435 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 CCDC185Q8N715 623 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 KDM1BQ8NB78 822 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 CENPIQ92674 756 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 ALG14Q96F25 216 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 ZNF419Q96HQ0 510 aaPredicted RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 VCPIP1Q96JH7 1222 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 SYT11Q9BT88 431 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 NUSAP1Q9BXS6 441 aaKnown RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 ZYG11BQ9C0D3 744 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 XPO4Q9C0E2 1151 aaKnown RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 TTYH3Q9C0H2 523 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 MIR1-1HGQ9H1L0 117 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 OSBPL2Q9H1P3 480 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 FBRSQ9HAH7 460 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 PARVAQ9NVD7 372 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 MYO1AQ9UBC5 1043 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 NCKAP1Q9Y2A7 1128 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 TBC1D30Q9Y2I9 924 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 LUC7L2Q9Y383 392 aaKnown RBP10.62□□□□□ -0.71
FAM49A-202ENST00000406434 NUMA1Q14980 2115 aa10.62□□□□□ -0.71
FAM49A-202ENST00000406434 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
FAM49A-202ENST00000406434 CEP250Q9BV73 2442 aa10.61□□□□□ -0.71
FAM49A-202ENST00000406434 IGLV3-10A0A075B6K4 115 aa10.61□□□□□ -0.71
FAM49A-202ENST00000406434 A0A0D9SEW6 157 aa10.61□□□□□ -0.71
FAM49A-202ENST00000406434 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms