RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 CASC4Q6P4E1 433 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 FBXO46Q6PJ61 603 aaPredicted RBP12.1□□□□□ -0.47
SMS-202ENST00000404933 C14orf80Q86SX3 495 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 PRPF39Q86UA1 669 aaKnown RBP12.1□□□□□ -0.47
SMS-202ENST00000404933 GIPC2Q8TF65 315 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 CKAP2Q8WWK9 683 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 DPF3Q92784 378 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 ALKBH8Q96BT7 664 aaKnown RBP12.1□□□□□ -0.47
SMS-202ENST00000404933 VWCEQ96DN2 955 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 ZNF558Q96NG5 402 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 VN1R3Q9BXE9 311 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 C11orf49Q9H6J7 331 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 PLAC1Q9HBJ0 212 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 PPARGC1AQ9UBK2 798 aaKnown RBP12.1□□□□□ -0.47
SMS-202ENST00000404933 ZNF180Q9UJW8 692 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
SMS-202ENST00000404933 A0A1W2PPM1 405 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SLC12A8A0AV02 714 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ARHGAP42A6NI28 874 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CLGNO14967 610 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ADAM12O43184 909 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SNX3O60493 162 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 EFCAB14O75071 495 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SPAG7O75391 227 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 PIAS1O75925 651 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 TBX18O95935 607 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 IGLV3-27P01718 113 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 C1QAP02745 245 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SOD2P04179 222 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CCNB1P14635 433 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 RHOQP17081 205 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ATF6P18850 670 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 KRT4P19013 534 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 NFKB1P19838 968 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MGAT1P26572 445 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CD68P34810 354 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 GJA8P48165 433 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SESN2P58004 480 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 IL9RQ01113 521 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 RING1Q06587 406 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MS4A13Q5J8X5 152 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 AFMIDQ63HM1 303 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MIB1Q86YT6 1006 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CTAGE3PQ8IX95 158 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 LRRC34Q8IZ02 419 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ZNF276Q8N554 614 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 PPM1NQ8N819 430 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 PDZD8Q8NEN9 1154 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MZB1Q8WU39 189 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 OVCA2Q8WZ82 227 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ZNF689Q96CS4 500 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 PPP1R2P1Q96PQ5 205 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SLC39A8Q9C0K1 460 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 KIF9Q9HAQ2 790 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 HSFX1Q9UBD0 423 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 AFF4Q9UHB7 1163 aaKnown RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 USP15Q9Y4E8 981 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 FAM159BA6NKW6 160 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 AP3B1O00203 1094 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 MATN3O15232 486 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 TLR5O60602 858 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MAFKO60675 156 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 WFS1O76024 890 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 TIMP1P01033 207 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MT-ND3P03897 115 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 VIMP08670 466 aaKnown RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 RPL17P18621 184 aaKnown RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 PGAM1P18669 254 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CCNG1P51959 295 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CCDC15Q0P6D6 951 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 TPGS2Q68CL5 300 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ZNF683Q8IZ20 524 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 SLC39A11Q8N1S5 342 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CFAP61Q8NHU2 1237 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ZSCAN18Q8TBC5 510 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 DENND1AQ8TEH3 1009 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 TMEM169Q96HH4 297 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 GORASP1Q9BQQ3 440 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 CLSTN3Q9BQT9 956 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 ZYG11BQ9C0D3 744 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 PRDM5Q9NQX1 630 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 BFARQ9NZS9 450 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MPP6Q9NZW5 540 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 VANGL2Q9ULK5 521 aa12.09□□□□□ -0.47
SMS-202ENST00000404933 MAGED2Q9UNF1 606 aaPredicted RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 HBS1LQ9Y450 684 aaKnown RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 NYNRINQ9P2P1 1898 aaKnown RBP12.09□□□□□ -0.47
SMS-202ENST00000404933 IGLV3-10A0A075B6K4 115 aa12.08□□□□□ -0.48
SMS-202ENST00000404933 C2CD2LO14523 706 aa12.08□□□□□ -0.48
SMS-202ENST00000404933 TYROBPO43914 113 aa12.08□□□□□ -0.48
SMS-202ENST00000404933 CACNG3O60359 315 aa12.08□□□□□ -0.48
SMS-202ENST00000404933 ATP5HO75947 161 aa12.08□□□□□ -0.48
SMS-202ENST00000404933 KRT37O76014 449 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms