RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 NMBRP28336 390 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 FDFT1P37268 417 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 ARHGAP1Q07960 439 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 CTBP1Q13363 440 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 CNGA3Q16281 694 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 LSM12Q3MHD2 195 aaKnown RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 ARL13AQ5H913 290 aaPredicted RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 C6orf52Q5T4I8 152 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 STEAP4Q687X5 459 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 PGM2L1Q6PCE3 622 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 ACAD11Q709F0 780 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 NPWQ8N729 165 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 ANKRD52Q8NB46 1076 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.23□□□□□ -0.45
RBM39-206ENST00000403542 KCTD4Q8WVF5 259 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 NPAS2Q99743 824 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 CENPKQ9BS16 269 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 UBE2OQ9C0C9 1292 aaKnown RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 DDX18Q9NVP1 670 aaKnown RBP12.23□□□□□ -0.45
RBM39-206ENST00000403542 USP3Q9Y6I4 520 aa12.23□□□□□ -0.45
RBM39-206ENST00000403542 C15orf38-AP3S2A0A0A6YYH1 394 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 NEMP2A6NFY4 417 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 HDCP19113 662 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 CNTFP26441 200 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 PIK3R1P27986 724 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 HOXA11P31270 313 aaPredicted RBP12.22□□□□□ -0.45
RBM39-206ENST00000403542 GARSP41250 739 aaKnown RBP12.22□□□□□ -0.45
RBM39-206ENST00000403542 PTPN9P43378 593 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 GRIA4P48058 902 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 BCAT1P54687 386 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 MS4A2Q01362 244 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 DEUP1Q05D60 604 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 FLOT2Q14254 428 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 GRM3Q14832 879 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 C9orf57Q5W0N0 161 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 OTOP3Q7RTS5 596 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 ARPINQ7Z6K5 226 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 SPATA22Q8NHS9 363 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 RAB3IL1Q8TBN0 382 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 GRIP2Q9C0E4 1043 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 VPS33BQ9H267 617 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 ZDHHC2Q9UIJ5 367 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 NRP1O14786 923 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 CSPG5O95196 566 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 JCHAINP01591 159 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 SRGAP2BP0DMP2 458 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 SPRP35270 261 aaPredicted RBP12.22□□□□□ -0.45
RBM39-206ENST00000403542 MATKP42679 507 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 SOX4Q06945 474 aaPredicted RBP12.22□□□□□ -0.45
RBM39-206ENST00000403542 ZBTB17Q13105 803 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 MPP3Q13368 585 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 POU6F1Q14863 301 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 NRF1Q16656 503 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 FBXO47Q5MNV8 452 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 DENND6AQ8IWF6 608 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 DSELQ8IZU8 1212 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 BHLHE22Q8NFJ8 381 aaPredicted RBP12.22□□□□□ -0.45
RBM39-206ENST00000403542 KCNK16Q96T55 309 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 RBBP8Q99708 897 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 RHOBTB2Q9BYZ6 727 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 CYP4F12Q9HCS2 524 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 DNAJC28Q9NX36 388 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 UBAP1Q9NZ09 502 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 BFARQ9NZS9 450 aa12.22□□□□□ -0.45
RBM39-206ENST00000403542 KPNA7A9QM74 516 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 DDNO94850 711 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 NFKB1P19838 968 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 PTPN3P26045 913 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 PLK1P53350 603 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 USP10Q14694 798 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 GRIK4Q16099 956 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 ANKRD20A4Q4UJ75 823 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 OTUD1Q5VV17 481 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 EPGNQ6UW88 154 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 LAYNQ6UX15 382 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 TMC7Q7Z402 723 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 KCNMB4Q86W47 210 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 SPATA24Q86W54 205 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 SLC41A1Q8IVJ1 513 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 PCDH20Q8N6Y1 951 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 CENPIQ92674 756 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 DCUN1D1Q96GG9 259 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 VPS39Q96JC1 886 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 NDNQ99608 321 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 GORASP1Q9BQQ3 440 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 FTHL17Q9BXU8 183 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 ACE2Q9BYF1 805 aaPredicted RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 LRRC4Q9HBW1 653 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 ETAA1Q9NY74 926 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 RUVBL2Q9Y230 463 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 PIN4Q9Y237 131 aaKnown RBP12.21□□□□□ -0.45
RBM39-206ENST00000403542 PCDHB12Q9Y5F1 795 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 CDY2AQ9Y6F7 541 aa12.21□□□□□ -0.45
RBM39-206ENST00000403542 CDY1Q9Y6F8 540 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms