RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 CDH19Q9H159 772 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 SNX15Q9NRS6 342 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 SYBUQ9NX95 663 aa20.27■□□□□ 0.83
CCDC47-202ENST00000403162 F5H423 210 aaPredicted RBP20.26■□□□□ 0.83
CCDC47-202ENST00000403162 RNF103O00237 685 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 DCXO43602 365 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 AP1G1O43747 822 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 ADAMTS4O75173 837 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 POLBP06746 335 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 GOT1P17174 413 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 ARL4AP40617 200 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 DLG1Q12959 904 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 TRIP10Q15642 601 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 ANKRD20A4Q4UJ75 823 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 SPANXN3Q5MJ09 141 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 ARHGAP17Q68EM7 881 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 KIF12Q96FN5 646 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 CERS2Q96G23 380 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 NME7Q9Y5B8 376 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 COL1A2P08123 1366 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 SCN1AP35498 2009 aa20.26■□□□□ 0.83
CCDC47-202ENST00000403162 ZBTB14O43829 449 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 GLUD2P49448 558 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 RPS6KA3P51812 740 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 KLF10Q13118 480 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 MMEL1Q495T6 779 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 TCHHL1Q5QJ38 904 aaPredicted RBP20.25■□□□□ 0.83
CCDC47-202ENST00000403162 OGFRL1Q5TC84 451 aaPredicted RBP20.25■□□□□ 0.83
CCDC47-202ENST00000403162 STRADAQ7RTN6 431 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 LINC01465Q8N7H1 131 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 CLEC4CQ8WTT0 213 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 KATNAL1Q9BW62 490 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 COG4Q9H9E3 785 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 LOC100653049A0A140TA62 436 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 TMEM114B3SHH9 223 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 MFSD11O43934 449 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 KRT34O76011 436 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 SMIM10L2AP0DMW4 78 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 SMIM10L2BP0DMW5 78 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 SERPINB8P50452 374 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 SH3BGRP55822 239 aaPredicted RBP20.25■□□□□ 0.83
CCDC47-202ENST00000403162 PDK3Q15120 406 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 SOWAHAQ2M3V2 549 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 CXCL17Q6UXB2 119 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 P2RY11Q96G91 374 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 FERMT1Q9BQL6 677 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 MTG1Q9BT17 334 aaPredicted RBP20.25■□□□□ 0.83
CCDC47-202ENST00000403162 EPB41L1Q9H4G0 881 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 SETD4Q9NVD3 440 aa20.25■□□□□ 0.83
CCDC47-202ENST00000403162 PIH1D1Q9NWS0 290 aaKnown RBP20.25■□□□□ 0.83
CCDC47-202ENST00000403162 ERVK-10P10266 1014 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 PSMB4P28070 264 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 GRIA2P42262 883 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 RPL34P49207 117 aaKnown RBP20.24■□□□□ 0.83
CCDC47-202ENST00000403162 CHN2P52757 468 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 NKX3-2P78367 333 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 PYROXD2Q8N2H3 581 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 DCLK2Q8N568 766 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 RBBP8Q99708 897 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 ZNF358Q9NW07 568 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 SNX9Q9Y5X1 595 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 HAS3O00219 553 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 BST2Q10589 180 aaKnown RBP20.24■□□□□ 0.83
CCDC47-202ENST00000403162 PEX6Q13608 980 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 UGT2A3Q6UWM9 527 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 UNC93AQ86WB7 457 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 PSTKQ8IV42 348 aaKnown RBP20.24■□□□□ 0.83
CCDC47-202ENST00000403162 ZNF781Q8N8C0 355 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 ICA1LQ8NDH6 482 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 PGBD4Q96DM1 585 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 C6orf203Q9P0P8 240 aaPredicted RBP20.24■□□□□ 0.83
CCDC47-202ENST00000403162 FZD10Q9ULW2 581 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 PRPF19Q9UMS4 504 aaKnown RBP20.24■□□□□ 0.83
CCDC47-202ENST00000403162 RPS6KL1Q9Y6S9 549 aa20.24■□□□□ 0.83
CCDC47-202ENST00000403162 SMIM31A0A1B0GVY4 71 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 RRN3P2A6NIE6 340 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 H2AFYO75367 372 aaKnown RBP20.23■□□□□ 0.83
CCDC47-202ENST00000403162 HSPA4LO95757 839 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 MYCP01106 439 aaPredicted RBP20.23■□□□□ 0.83
CCDC47-202ENST00000403162 HSPA8P11142 646 aaKnown RBP20.23■□□□□ 0.83
CCDC47-202ENST00000403162 GLDCP23378 1020 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 SPRP35270 261 aaPredicted RBP20.23■□□□□ 0.83
CCDC47-202ENST00000403162 MLH1P40692 756 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 LIMK2P53671 638 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 USP4Q13107 963 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 LSAMPQ13449 338 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 FRG1Q14331 258 aaKnown RBP20.23■□□□□ 0.83
CCDC47-202ENST00000403162 KCNA10Q16322 511 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 SLC9B1Q4ZJI4 515 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 BSPRYQ5W0U4 402 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 CMC1Q7Z7K0 106 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 HIPK4Q8NE63 616 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 KLHDC9Q8NEP7 349 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 NAT14Q8WUY8 206 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC47-202ENST00000403162 NDUFA13Q9P0J0 144 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 IGSF9Q9P2J2 1179 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 PSMD13Q9UNM6 376 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 RALGAPA2Q2PPJ7 1873 aa20.23■□□□□ 0.83
CCDC47-202ENST00000403162 G3V2L1 256 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms