RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SSX2IPQ9Y2D8 614 aa16.33■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FCHO1O14526 889 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GYG2O15488 501 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GSC2O15499 205 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 URODP06132 367 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MYL2P10916 166 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 L1CAMP32004 1257 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PSMD5Q16401 504 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PPP6R3Q5H9R7 873 aaPredicted RBP16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SLC8B1Q6J4K2 584 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PRSS55Q6UWB4 352 aaPredicted RBP16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ARCQ7LC44 396 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 POF1BQ8WVV4 589 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SIGLEC10Q96LC7 697 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ZCWPW1Q9H0M4 648 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 IRAK3Q9Y616 596 aa16.32■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MYBPHLA2RUH7 354 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BIRC5O15392 142 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ATP5BP06576 529 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ESRRAP11474 423 aaPredicted RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 DNAJB1P25685 340 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CNTFP26441 200 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CRHR1P34998 444 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MRPS5P82675 430 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TSPY1Q01534 308 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CAMK1Q14012 370 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MAPRE1Q15691 268 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 RSPO2Q6UXX9 243 aaPredicted RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CYS1Q717R9 158 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ZNF534Q76KX8 674 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SLC26A9Q7LBE3 791 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 LRRTM3Q86VH5 581 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TTC8Q8TAM2 541 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 E2F7Q96AV8 911 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FBXO6Q9NRD1 293 aaPredicted RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SMYD2Q9NRG4 433 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FAM49BQ9NUQ9 324 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GRM6O15303 877 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CSH1P0DML2 217 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CSH2P0DML3 217 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ERVFC1P60507 584 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SARNPP82979 210 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TMPRSS15P98073 1019 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CREMQ03060 361 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GPM6BQ13491 265 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SEMA5AQ13591 1074 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 DBN1Q16643 649 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PRPF38BQ5VTL8 546 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TIFABQ6ZNK6 161 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TMC7Q7Z402 723 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 DCP1BQ8IZD4 617 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ARHGAP24Q8N264 748 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TEX9Q8N6V9 391 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ARMC2Q8NEN0 867 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MCUR1Q96AQ8 359 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NAF1Q96HR8 494 aaKnown RBP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TMEM209Q96SK2 561 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TCF25Q9BQ70 676 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 LPIN3Q9BQK8 851 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CLSTN3Q9BQT9 956 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TLR9Q9NR96 1032 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 DONSONQ9NYP3 566 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MAD1L1Q9Y6D9 718 aa16.31■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CHD7Q9P2D1 2997 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FAM237BA0A1B0GVD1 139 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 HACD1B0YJ81 288 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 ENTPD5O75356 428 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GABBR2O75899 941 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 METTL18O95568 372 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 OCRLQ01968 901 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GBE1Q04446 702 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BST1Q10588 318 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TEX44Q53QW1 395 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 NUDCD3Q8IVD9 361 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PCED1BQ96HM7 432 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 WWP1Q9H0M0 922 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 DHX35Q9H5Z1 703 aaKnown RBP16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CERS4Q9HA82 394 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 PRDM16Q9HAZ2 1276 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 STOML1Q9UBI4 398 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 AP4E1Q9UPM8 1137 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CDY1Q9Y6F8 540 aa16.3■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MAP3K6O95382 1288 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CXCL14O95715 111 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GCKP35557 465 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 FDFT1P37268 417 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 SMARCB1Q12824 385 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 GPR17Q13304 367 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 BMPR2Q13873 1038 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 CHI3L2Q15782 390 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 TSNAXIP1Q2TAA8 658 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 MDH1BQ5I0G3 518 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 STXBP5Q5T5C0 1151 aa16.29■□□□□ 0.2
CHRFAM7A-203ENST00000401522 STEAP4Q687X5 459 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms