RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 MAML3Q96JK9 1138 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 RAD9AQ99638 391 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 LBHD1Q9BQE6 289 aaPredicted RBP4.04□□□□□ -1.76
CLHC1-201ENST00000401408 NTMT1Q9BV86 223 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 FAM129AQ9BZQ8 928 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 ZNF518BQ9C0D4 1074 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 AZI2Q9H6S1 392 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 MVB12BQ9H7P6 319 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 COQ10BQ9H8M1 238 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 UPF2Q9HAU5 1272 aaKnown RBP4.04□□□□□ -1.76
CLHC1-201ENST00000401408 KCNK13Q9HB14 408 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 PALMDQ9NP74 551 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 A1CFQ9NQ94 594 aaKnown RBP4.04□□□□□ -1.76
CLHC1-201ENST00000401408 PFDN4Q9NQP4 134 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 ITGA11Q9UKX5 1188 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 AKT3Q9Y243 479 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 DERAQ9Y315 318 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 GPC6Q9Y625 555 aaPredicted RBP4.04□□□□□ -1.76
CLHC1-201ENST00000401408 COL4A1P02462 1669 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 COL3A1P02461 1466 aaPredicted RBP4.04□□□□□ -1.76
CLHC1-201ENST00000401408 DCHS1Q96JQ0 3298 aa4.04□□□□□ -1.76
CLHC1-201ENST00000401408 GOLGA6L4A6NEF3 574 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SLC22A31A6NKX4 558 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 GOLGA8MH3BSY2 632 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 TGFBR3LH3BV60 316 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 IGF2BP3O00425 579 aaKnown RBP eCLIP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 PSMD14O00487 310 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 AQP7O14520 342 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 C2CD2LO14523 706 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 HNRNPDLO14979 420 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 GPRIN2O60269 458 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 DNAJA2O60884 412 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CRTAPO75718 401 aaPredicted RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 AKR7A3O95154 331 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 PTBP3O95758 552 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 STAG3L3P0CL85 134 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 FDPSP14324 419 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 GCFC2P16383 781 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 PSMC2P35998 433 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 TRIM23P36406 574 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 PSMB10P40306 273 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SLC19A1P41440 591 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CASP3P42574 277 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 MAGEA10P43363 369 aaPredicted RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 GRIA4P48058 902 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 PCP4P48539 62 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 MTNR1BP49286 362 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CCR3P51677 355 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 BMXP51813 675 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 MFAP3P55082 362 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ACTR2P61160 394 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 NKX3-2P78367 333 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 PTPN11Q06124 597 aaPredicted RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 KDSRQ06136 332 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 FAAP100Q0VG06 881 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SREBF2Q12772 1141 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 RPS6KA2Q15349 733 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 MAPRE2Q15555 327 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 RAB30Q15771 203 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ZNF124Q15973 351 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 AANATQ16613 207 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ZNF790Q6PG37 636 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SLC36A4Q6YBV0 504 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 BEND4Q6ZU67 534 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 MICALCLQ6ZW33 695 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 BBS12Q6ZW61 710 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ADAT2Q7Z6V5 191 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ADGRA1Q86SQ6 560 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CEP57Q86XR8 500 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SLC43A2Q8N370 569 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 POU5F2Q8N7G0 328 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 FANCBQ8NB91 859 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 GLB1L3Q8NCI6 653 aaPredicted RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 HIPK4Q8NE63 616 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SCFD2Q8WU76 684 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SLC35B4Q969S0 331 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 DCPSQ96C86 337 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 TUBGCP5Q96RT8 1024 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 KCTD15Q96SI1 283 aaPredicted RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 OSMRQ99650 979 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CARD6Q9BX69 1037 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ACE2Q9BYF1 805 aaPredicted RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CCSER1Q9C0I3 900 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 QRSL1Q9H0R6 528 aaKnown RBP4.03□□□□□ -1.76
CLHC1-201ENST00000401408 RHBGQ9H310 441 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SH2D4AQ9H788 454 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 LMBRD1Q9NUN5 540 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 HCFC1R1Q9NWW0 138 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 RAB20Q9NX57 234 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ATP6V1HQ9UI12 483 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 TMPRSS11EQ9UL52 423 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 DDX19BQ9UMR2 479 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CYP8B1Q9UNU6 501 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 TIMM22Q9Y584 194 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CORINQ9Y5Q5 1042 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 LYVE1Q9Y5Y7 322 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 CEMIPQ8WUJ3 1361 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 SPTBN4Q9H254 2564 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 ZNF536O15090 1300 aa4.03□□□□□ -1.76
CLHC1-201ENST00000401408 A0A088AWK7 358 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms