RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 NSMCE3Q96MG7 304 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 MTG2Q9H4K7 406 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 CLEC1BQ9P126 229 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 RWDD3Q9Y3V2 267 aa11.98□□□□□ -0.49
SKA3-203ENST00000400018 MYO10Q9HD67 2058 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 CBX4O00257 560 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 MUSKO15146 869 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ACSL3O95573 720 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 TPH1P17752 444 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 CD68P34810 354 aaPredicted RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 PTPN7P35236 360 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 CTSOP43234 321 aaPredicted RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 SEMG2Q02383 582 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 UBE3AQ05086 875 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 RAB30Q15771 203 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 PCSK7Q16549 785 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ANO4Q32M45 955 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 PRSS36Q5K4E3 855 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ASTLQ6HA08 431 aaPredicted RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 MPP5Q8N3R9 675 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 PDCD7Q8N8D1 485 aaKnown RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 NKD2Q969F2 451 aaPredicted RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 GORASP1Q9BQQ3 440 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ZYG11BQ9C0D3 744 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 OSBPL2Q9H1P3 480 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 OLA1Q9NTK5 396 aaKnown RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 RRN3Q9NYV6 651 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 SH3BP1Q9Y3L3 701 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 DENND4CQ5VZ89 1909 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 TRAV19A0A0A6YYK7 116 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 NEDD8-MDP1E9PL57 170 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 GAS8O95995 478 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 SHBGP04278 402 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 PRKCGP05129 697 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 GARSP41250 739 aaKnown RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 RGS19P49795 217 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 COG7P83436 770 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ITKQ08881 620 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 NNTQ13423 1086 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 SKIV2LQ15477 1246 aaKnown RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 UAP1Q16222 522 aaPredicted RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 SLC45A4Q5BKX6 768 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ANKRD20A2Q5SQ80 823 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ANKRD20A1Q5TYW2 823 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ANKRD20A3Q5VUR7 823 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 IL31Q6EBC2 164 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 LRRC31Q6UY01 552 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 IGDCC3Q8IVU1 814 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 PDZD8Q8NEN9 1154 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 RNF217Q8TC41 542 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 MRPL38Q96DV4 380 aaKnown RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 KXD1Q9BQD3 176 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 WDR83Q9BRX9 315 aaKnown RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 PLA2G2FQ9BZM2 168 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 EBF3Q9H4W6 596 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 KLHL8Q9P2G9 620 aaPredicted RBP11.97□□□□□ -0.49
SKA3-203ENST00000400018 ZNF212Q9UDV6 495 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 ANAPC5Q9UJX4 755 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 DOCK8Q8NF50 2099 aa11.97□□□□□ -0.49
SKA3-203ENST00000400018 RASA4BC9J798 803 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 RASA4O43374 803 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 MAFKO60675 156 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 ITGAVP06756 1048 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 ARSAP15289 507 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 TGM2P21980 687 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 PTPN3P26045 913 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 CD70P32970 193 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 STK19P49842 368 aaPredicted RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 PTK6Q13882 451 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 KCNC3Q14003 757 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 FAM78AQ5JUQ0 283 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 ADGRF1Q5T601 910 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 SNX30Q5VWJ9 437 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 FOXR1Q6PIV2 292 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 UNC5BQ8IZJ1 945 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 RTL3Q8N8U3 475 aaKnown RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 AENQ8WTP8 325 aaKnown RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 UBLCP1Q8WVY7 318 aaPredicted RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 TDP1Q9NUW8 608 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 UXTQ9UBK9 157 aaPredicted RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 H0Y626 953 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 NFKB1P19838 968 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 LTBRP36941 435 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 CHRNA4P43681 627 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 SLCO1A2P46721 670 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 RGRP47804 291 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 PAFAH1B3Q15102 231 aaKnown RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 KYNUQ16719 465 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 RNF219Q5W0B1 726 aaPredicted RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 NUGGCQ68CJ6 796 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 WDR93Q6P2C0 686 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 NPAS3Q8IXF0 933 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 TDRD5Q8NAT2 981 aaKnown RBP11.96□□□□□ -0.49
SKA3-203ENST00000400018 GCNAQ96QF7 691 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 PRO3102Q9H379 93 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 NT5MQ9NPB1 228 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 SLC17A6Q9P2U8 582 aa11.96□□□□□ -0.49
SKA3-203ENST00000400018 SLC12A6Q9UHW9 1150 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms