RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 GARNL3Q5VVW2 1013 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 PLPPR4Q7Z2D5 763 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 HDXQ7Z353 690 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 METTL23Q86XA0 190 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 FAM114A1Q8IWE2 563 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 GUF1Q8N442 669 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 KAT5Q92993 513 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 LENG9Q96B70 501 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 SPACA9Q96E40 222 aaPredicted RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 CYFIP2Q96F07 1278 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 NUDCD1Q96RS6 583 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 CDK5RAP1Q96SZ6 601 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 GDF15Q99988 308 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 AMNQ9BXJ7 453 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 TLR10Q9BXR5 811 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 NSRP1Q9H0G5 558 aaKnown RBP6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 KLHL25Q9H0H3 589 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 TRPV6Q9H1D0 765 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 SH2D4AQ9H788 454 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 SELENONQ9NZV5 590 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 COX16Q9P0S2 106 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 RSPH14Q9UHP6 348 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 NFU1Q9UMS0 254 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 NAALADL1Q9UQQ1 740 aa6.4□□□□□ -1.39
TRAPPC13-202ENST00000399438 KCNK3O14649 394 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 TACC1O75410 805 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 KRT14P02533 472 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 GRM5P41594 1212 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 CARSP49589 748 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 NT5C2P49902 561 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 GIT2Q14161 759 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 WHAMMP3Q1A5X7 153 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 EPC2Q52LR7 807 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 POTEHQ6S545 545 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF571Q7Z3V5 609 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 CD302Q8IX05 232 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 U2AF1L4Q8WU68 220 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 DTNBP1Q96EV8 351 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF668Q96K58 619 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARL5BQ96KC2 179 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 PCED1AQ9H1Q7 454 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SAYSD1Q9NPB0 183 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SIRT3Q9NTG7 399 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 REV1Q9UBZ9 1251 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 PLAGL2Q9UPG8 496 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 PRELID1Q9Y255 219 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 C15orf41Q9Y2V0 281 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 MYH1P12882 1939 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 NCF1BA6NI72 391 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SMIM23A6NLE4 172 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 FIGNL2A6NMB9 653 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 NCF1CA8MVU1 366 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 EIF3CLB5ME19 914 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 PPM1BO75688 479 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ANXA6P08133 673 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 GLI1P08151 1106 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ITGA4P13612 1032 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 KCNC1P48547 511 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF157P51786 506 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 DLG4P78352 724 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 TDRD10Q5VZ19 366 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 PLA2G4FQ68DD2 849 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SLC30A9Q6PML9 568 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 C10orf67Q8IYJ2 551 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SFRP1Q8N474 314 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ZNF511Q8NB15 262 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SPATA4Q8NEY3 305 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 OR8K3Q8NH51 312 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ERMNQ8TAM6 284 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 CCDC127Q96BQ5 260 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ERGIC2Q96RQ1 377 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 EIF3CQ99613 913 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 RAVER2Q9HCJ3 691 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 TAS2R14Q9NYV8 317 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 GCNT4Q9P109 453 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 STK17AQ9UEE5 414 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 GPN3Q9UHW5 284 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ANAPC5Q9UJX4 755 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 SNX12Q9UMY4 172 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 KLHL20Q9Y2M5 609 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 NAALAD2Q9Y3Q0 740 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 CCDC88AQ3V6T2 1871 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 NAV1Q8NEY1 1877 aa6.39□□□□□ -1.39
TRAPPC13-202ENST00000399438 ACOD1A6NK06 481 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 KDM1AO60341 852 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ERLIN1O75477 346 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ITGA5P08648 1049 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 HNF1BP35680 557 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PITPNBP48739 271 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ARSDP51689 593 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 STAT5BP51692 787 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 PRELPP51888 382 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 ATXN3P54252 364 aaPredicted RBP6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 NPEPPSP55786 919 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 GFRA1P56159 465 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 RAC3P60763 192 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 SPIRE1Q08AE8 756 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 LAMB3Q13751 1172 aa6.38□□□□□ -1.39
TRAPPC13-202ENST00000399438 EFTUD2Q15029 972 aaKnown RBP eCLIP6.38□□□□□ -1.391e-6■■■■■ 35.8
TRAPPC13-202ENST00000399438 LINC01559Q495D7 138 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms