RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZNF554Q86TJ5 538 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 CHERPQ8IWX8 916 aaKnown RBP14.27□□□□□ -0.13
APOB-202ENST00000399256 MICALL2Q8IY33 904 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 PYROXD2Q8N2H3 581 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 RIN3Q8TB24 985 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 KHSRPQ92945 711 aaKnown RBP eCLIP14.27□□□□□ -0.137e-9■■□□□ 13.5
APOB-202ENST00000399256 CSPG4P5Q96PW8 444 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 CDT1Q9H211 546 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 SUDS3Q9H7L9 328 aaPredicted RBP14.27□□□□□ -0.13
APOB-202ENST00000399256 COQ10BQ9H8M1 238 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 ZNF214Q9UL59 606 aaPredicted RBP14.27□□□□□ -0.13
APOB-202ENST00000399256 FAF1Q9UNN5 650 aaPredicted RBP14.27□□□□□ -0.13
APOB-202ENST00000399256 AP4E1Q9UPM8 1137 aa14.27□□□□□ -0.13
APOB-202ENST00000399256 MATN2O00339 956 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 DPYSL4O14531 572 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 VAPBO95292 243 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 JUNP05412 331 aaKnown RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 POLBP06746 335 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ZNF26P17031 533 aaPredicted RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 PPARGP37231 505 aaPredicted RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 GRTP1Q5TC63 336 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ACVR1CQ8NER5 493 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 REPS2Q8NFH8 660 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 CNDP1Q96KN2 507 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 RBBP8Q99708 897 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 CPNE1Q99829 537 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 HAUS8Q9BT25 410 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 TMEM165Q9HC07 324 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ADA2Q9NZK5 511 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ARHGEF37A1IGU5 675 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 RNF103O00237 685 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 USP12O75317 370 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 PIGNO95427 931 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 GOT1P17174 413 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 UBA1P22314 1058 aaKnown RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 NAB1Q13506 487 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ITGA7Q13683 1181 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 STXBP2Q15833 593 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 LCLAT1Q6UWP7 414 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 TRIM50Q86XT4 487 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ALDH16A1Q8IZ83 802 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 CCDC185Q8N715 623 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 CLEC4CQ8WTT0 213 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 SREK1Q8WXA9 508 aaKnown RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 DLG3Q92796 817 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 HPDLQ96IR7 371 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 NMRAL1Q9HBL8 299 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 C20orf96Q9NUD7 363 aaPredicted RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 ARHGEF38Q9NXL2 777 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 TK2O00142 265 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ACOT8O14734 319 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 HDAC3O15379 428 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ZNF23P17027 643 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 SAT1P21673 171 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 PROZP22891 400 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ADRM1Q16186 407 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 ERI1Q8IV48 349 aaKnown RBP14.26□□□□□ -0.13
APOB-202ENST00000399256 MYO1HQ8N1T3 1032 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 PTPRHQ9HD43 1115 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 GGA3Q9NZ52 723 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 VPS28Q9UK41 221 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 PADI4Q9UM07 663 aa14.26□□□□□ -0.13
APOB-202ENST00000399256 IGKV6D-21A0A0A0MT36 114 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 PAPSS1O43252 624 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 ZFXP17010 805 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 SPRP35270 261 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 NR2C2P49116 596 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 RPL14P50914 215 aaKnown RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 CDH15P55291 814 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 CREB5Q02930 508 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 DPYSL2Q16555 572 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 PPP1R26Q5T8A7 1209 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 IER5Q5VY09 327 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 POTEHQ6S545 545 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 TRAPPC12Q8WVT3 735 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 LRTOMTQ8WZ04 291 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 MAML3Q96JK9 1138 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 PCDHAC1Q9H158 963 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 ACAD9Q9H845 621 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 BARX2Q9UMQ3 279 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 COL11A1P12107 1806 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 GRID2O43424 1007 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 MFSD11O43934 449 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 C2P06681 752 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 RPL10P27635 214 aaKnown RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 GRIA4P48058 902 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 CDK9P50750 372 aaKnown RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 ARL13AQ5H913 290 aaPredicted RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 TTC30AQ86WT1 665 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 PCDH20Q8N6Y1 951 aaKnown RBP14.25□□□□□ -0.13
APOB-202ENST00000399256 OR52K1Q8NGK4 314 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 FNDC8Q8TC99 324 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 WRNIP1Q96S55 665 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 TMEM79Q9BSE2 394 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 TRPV6Q9H1D0 765 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 ZDHHC2Q9UIJ5 367 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 RAP2CQ9Y3L5 183 aa14.25□□□□□ -0.13
APOB-202ENST00000399256 ANK1P16157 1881 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms