RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TNFRSF4P43489 277 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GNA12Q03113 381 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ADCY2Q08462 1091 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SLC12A1Q13621 1099 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PTPRNQ16849 979 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ANKRD20A8PQ5CZ79 823 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NCBP2-AS2Q69YL0 99 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AADACL2Q6P093 401 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PEX26Q7Z412 305 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 VSIG1Q86XK7 387 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SYCE1Q8N0S2 351 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TMEM105Q8N8V8 129 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KCTD6Q8NC69 237 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 USP33Q8TEY7 942 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CELF6Q96J87 481 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MRGPRX3Q96LB0 322 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 NELL2Q99435 816 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CALN1Q9BXU9 219 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ACE2Q9BYF1 805 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MFSD1Q9H3U5 465 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CATSPERBQ9H7T0 1116 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KCND1Q9NSA2 647 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 POLR3BQ9NW08 1133 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ELOVL2Q9NXB9 296 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DDX56Q9NY93 547 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 AMFRQ9UKV5 643 aa12.73□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF487B1APH4 448 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZSCAN12O43309 604 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CD160O95971 181 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HNRNPLP14866 589 aaKnown RBP eCLIP12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TIE1P35590 1138 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ENPP2Q13822 863 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DMC1Q14565 340 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EIF4HQ15056 248 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LLGL1Q15334 1064 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FBXO43Q4G163 708 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DGKKQ5KSL6 1271 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SLC9A4Q6AI14 798 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF783Q6ZMS7 281 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SPOCD1Q6ZMY3 1216 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF557Q8N988 423 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 IL17RCQ8NAC3 791 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EXD1Q8NHP7 514 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PBXIP1Q96AQ6 731 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 HMCESQ96FZ2 354 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RNF157Q96PX1 679 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TLR10Q9BXR5 811 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CIPCQ9C0C6 399 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SLC39A8Q9C0K1 460 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CHRDQ9H2X0 955 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 VPS51Q9UID3 782 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SIT1Q9Y3P8 196 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ACTL7AQ9Y615 435 aa12.72□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CKAP5Q14008 2032 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 hCG_1818297A0A087WSY0 165 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MIF4GDA9UHW6 222 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 WASH3PC4AMC7 463 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RASA4BC9J798 803 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 STK25O00506 426 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FANCGO15287 622 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DAPK3O43293 454 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RASA4O43374 803 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MFSD11O43934 449 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GPR37L1O60883 481 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RAMP2O60895 175 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ADAM23O75077 832 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DLDP09622 509 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PYGMP11217 842 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 KRT10P13645 584 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 IL12RB1P42701 662 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RPS9P46781 194 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 CLCN5P51795 746 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 OXCT1P55809 520 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ARF5P84085 180 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 GBE1Q04446 702 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF211Q13398 564 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LRRC32Q14392 662 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF234Q14588 700 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PAFAH1B3Q15102 231 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 C2orf27AQ580R0 203 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 LCE2DQ5TA82 110 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ARHGAP36Q6ZRI8 547 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SLC35F6Q8N357 371 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 SYNPOQ8N3V7 929 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 FBXL6Q8N531 539 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 ZNF513Q8N8E2 541 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 DCAF4L2Q8NA75 395 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 TRIM58Q8NG06 486 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 RPLP0P6Q8NHW5 317 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 EXOC4Q96A65 974 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
HLA-DQB1-203ENST00000399082 MAGEH1Q9H213 219 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms