RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ERVK-9P63128 1117 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 OVOS1Q6IE37 1185 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 KRT74Q7RTS7 529 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 C11orf96Q7Z7L8 435 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 DEPDC4Q8N2C3 294 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 RP9Q8TA86 221 aaKnown RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MKL1Q969V6 931 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SLC35C1Q96A29 364 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MPP4Q96JB8 637 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SPG21Q9NZD8 308 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 COL1A2P08123 1366 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 STX11O75558 287 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CELF2O95319 508 aaKnown RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 FGF19O95750 216 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 VTNP04004 478 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 NTSP30990 170 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 HTR7P34969 479 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF143P52747 638 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 DPYSQ14117 519 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TCEA2Q15560 299 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 BMT2Q1RMZ1 405 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SNX30Q5VWJ9 437 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF549Q6P9A3 640 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CYP20A1Q6UW02 462 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SH3BP5LQ7L8J4 393 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CREG2Q8IUH2 290 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PROX1Q92786 737 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SPATC1LQ9H0A9 340 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 KLHL25Q9H0H3 589 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SEMA4AQ9H3S1 761 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CYP4F12Q9HCS2 524 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 KCNMB3Q9NPA1 279 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF112Q9UJU3 913 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF510Q9Y2H8 683 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ARIH1Q9Y4X5 557 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MANSC4A6NHS7 340 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CLOCKO15516 846 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 LIASO43766 372 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MTA2O94776 668 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 BAIAP3O94812 1187 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TGDSO95455 350 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 LBPP18428 481 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MMP13P45452 471 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 GSTM5P46439 218 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CDC42P60953 191 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ADIGQ0VDE8 80 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 NDUFA5Q16718 116 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PTAR1Q7Z6K3 402 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 EXOC3L1Q86VI1 746 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 FBXO16Q8IX29 292 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 HEXDCQ8WVB3 486 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PPP3R2Q96LZ3 170 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SH2D3AQ9BRG2 576 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PORCNQ9H237 461 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 KLHL31Q9H511 634 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PRDM8Q9NQV8 689 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PRPF19Q9UMS4 504 aaKnown RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TFR2Q9UP52 801 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TAF6LQ9Y6J9 622 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 DDX3XO00571 662 aaKnown RBP eCLIP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ACADMP11310 421 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TUBP50607 506 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ELF3P78545 371 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 GTF2BQ00403 316 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PSMD5Q16401 504 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 IQSEC1Q6DN90 963 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 NEK10Q6ZWH5 1172 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 FAM131BQ86XD5 332 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ZNF276Q8N554 614 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 ANKRD49Q8WVL7 239 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 NELL1Q92832 810 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MTMR8Q96EF0 704 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TINF2Q9BSI4 451 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TLR10Q9BXR5 811 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 OSBPL6Q9BZF3 934 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 LACRTQ9GZZ8 138 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SPRTNQ9H040 489 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 OPTCQ9UBM4 332 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TRIM38O00635 465 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 TRUB2O95900 331 aaKnown RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 OGNP20774 298 aaKnown RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 GPR15P49685 360 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 CCR3P51677 355 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 HIRAP54198 1017 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 C21orf59P57076 290 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 PEX6Q13608 980 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SLC15A2Q16348 729 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 RSBN1Q5VWQ0 802 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MFSD7Q6UXD7 560 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 STAG3L4Q8TBR4 150 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 HSFY1Q96LI6 401 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 FDXACB1Q9BRP7 624 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 HDHD2Q9H0R4 259 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 SNTG2Q9NY99 539 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 MBD2Q9UBB5 411 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 LEF1Q9UJU2 399 aaPredicted RBP8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 VAV3Q9UKW4 847 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 GSTK1Q9Y2Q3 226 aa8.5□□□□□ -1.05
SPTLC3-201ENST00000399002 RBM47A0AV96 593 aaKnown RBP8.49□□□□□ -1.05
SPTLC3-201ENST00000399002 ADCY6O43306 1168 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms