RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 C20orf96Q9NUD7 363 aaPredicted RBP13.38□□□□□ -0.27
PRAME-201ENST00000398741 MID2Q9UJV3 735 aa13.38□□□□□ -0.27
PRAME-201ENST00000398741 ZCWPW2A0A1B0GU75 182 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ERI2A8K979 691 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 G3V2L1 256 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FAM72CH0Y354 149 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 BUD23O43709 281 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 TRIM13O60858 407 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 F7P08709 466 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 KCNE1P15382 129 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ABCG1P45844 678 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 AIF1P55008 147 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SOX4Q06945 474 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 CCNIQ14094 377 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 LRRC36Q1X8D7 754 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FAM72AQ5TYM5 149 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FAM72DQ6L9T8 149 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 CLEC20AQ6ZU45 233 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FRMD7Q6ZUT3 714 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 HFE2Q6ZVN8 426 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ZNF467Q7Z7K2 595 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 FAM72BQ86X60 149 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FBXW8Q8N3Y1 598 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ADAM32Q8TC27 787 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 AGR3Q8TD06 166 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 IFT43Q96FT9 208 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SLC9A7Q96T83 725 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 DDX50Q9BQ39 737 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 OXCT2Q9BYC2 517 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 GBA3Q9H227 469 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 RRAGCQ9HB90 399 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 NMRAL1Q9HBL8 299 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 PAPOLBQ9NRJ5 636 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 POMPQ9Y244 141 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ZBTB24O43167 697 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 MTSS1O43312 755 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ZMPSTE24O75844 475 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SORBS2O94875 1100 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 C2P06681 752 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FAM200BP0CF97 657 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SMIM10L2AP0DMW4 78 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SMIM10L2BP0DMW5 78 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 PAPOLAP51003 745 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 CSE1LP55060 971 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 LILRA4P59901 499 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 BTKQ06187 659 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 KLF10Q13118 480 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 PEX6Q13608 980 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 DLG2Q15700 870 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 ARL13BQ3SXY8 428 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 SLC9B1Q4ZJI4 515 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 TCHHL1Q5QJ38 904 aaPredicted RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 CERCAMQ5T4B2 595 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 THEMIS2Q5TEJ8 643 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 NAPRTQ6XQN6 538 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 LIMS2Q7Z4I7 341 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 NTAN1Q96AB6 310 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 MFSD3Q96ES6 412 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 KCNK16Q96T55 309 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 GORASP1Q9BQQ3 440 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 KLHL4Q9C0H6 718 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 TCF7L2Q9NQB0 619 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 IARS2Q9NSE4 1012 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
PRAME-201ENST00000398741 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
PRAME-201ENST00000398741 KIF3CO14782 793 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 STRNO43815 780 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 CYP2B6P20813 491 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 NPY2RP49146 381 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 METTL21CQ5VZV1 264 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 PDSS2Q86YH6 399 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 HPS6Q86YV9 775 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 PHC3Q8NDX5 983 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 APOL2Q9BQE5 337 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 RTKNQ9BST9 563 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 ULBP1Q9BZM6 244 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 FAM192AQ9GZU8 254 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 ILKAPQ9H0C8 392 aaPredicted RBP13.36□□□□□ -0.27
PRAME-201ENST00000398741 BRD8Q9H0E9 1235 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 EBF3Q9H4W6 596 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 TLK1Q9UKI8 766 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 TRHDEQ9UKU6 1024 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 ZBTB14O43829 449 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 FBXO21O94952 628 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 APOA4P06727 396 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 NCAM1P13591 858 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 RAG1P15918 1043 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 NFKB1P19838 968 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 GJA5P36382 358 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 WSCD1Q658N2 575 aa13.36□□□□□ -0.27
PRAME-201ENST00000398741 CLEC14AQ86T13 490 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms