RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 NAT16Q8N8M0 369 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 FAM120BQ96EK7 910 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 LGMNQ99538 433 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 SNRNP25Q9BV90 132 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 FRMD8P1Q9BZ68 369 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 CERS4Q9HA82 394 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 CDHR5Q9HBB8 845 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 TCF7L2Q9NQB0 619 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 SEPT3Q9UH03 358 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 NFKBIEO00221 500 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 KRT6AP02538 564 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 KRT6BP04259 564 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 PSMA4P25789 261 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 CD86P42081 329 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 KRT6CP48668 564 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 DPYSL3Q14195 570 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 HECTD3Q5T447 861 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 SERPINA13PQ6UXR4 307 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 OTOP2Q7RTS6 562 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 C18orf25Q96B23 403 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 CLIP3Q96DZ5 547 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 PPP1R10Q96QC0 940 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 SCN3BQ9NY72 215 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 APC2O95996 2303 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 UNCXA6NJT0 531 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 RTN3O95197 1032 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 IGSF6O95976 241 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 ATP5BP06576 529 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 POLR2EP19388 210 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 MRPS6P82932 125 aaKnown RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 GTF2BQ00403 316 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 SETMARQ53H47 684 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 LRRC55Q6ZSA7 311 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 FAM183BPQ6ZVS7 135 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 ATG16L2Q8NAA4 619 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 MCOLN3Q8TDD5 553 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 COL26A1Q96A83 441 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 FAR2Q96K12 515 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 BBS2Q9BXC9 721 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 DPY30Q9C005 99 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 NINJ2Q9NZG7 142 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 MPP6Q9NZW5 540 aa11.74□□□□□ -0.53
PCDHGA8-201ENST00000398604 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ASTN1O14525 1302 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 APOC4-APOC2K7ER74 178 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 DCXO43602 365 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 MAFO75444 373 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 IL1BP01584 269 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 APOC2P02655 101 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 VAC14Q08AM6 782 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 CES5AQ6NT32 575 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 KIAA1324Q6UXG2 1013 aaKnown RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 CYP2R1Q6VVX0 501 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ETNPPLQ8TBG4 499 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ACO2Q99798 780 aaKnown RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 SEMA3CQ99985 751 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 MIR1-1HGQ9H1L0 117 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 KRT84Q9NSB2 600 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ARL15Q9NXU5 204 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 SLC24A2Q9UI40 661 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 N6AMT1Q9Y5N5 214 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 LAMA4Q16363 1823 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 SPEF2Q9C093 1822 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 C4BP0C0L5 1744 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 SLC15A5A6NIM6 579 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 EFCAB14O75071 495 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ERCC2P18074 760 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 TYMPP19971 482 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 DUSP4Q13115 394 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 MAMLD1Q13495 774 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 PABPC1LQ4VXU2 614 aaKnown RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 SCIMPQ6UWF3 145 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 BNC2Q6ZN30 1099 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 UNC5AQ6ZN44 842 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 C4orf32Q8N8J7 132 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 NDRG1Q92597 394 aaKnown RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 C2orf49Q9BVC5 232 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 TMEM245Q9H330 911 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ABCC13Q9NSE7 274 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 SPG21Q9NZD8 308 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 PACSIN3Q9UKS6 424 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 TMCC3Q9ULS5 477 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 CICQ96RK0 1608 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 CCDC85CA6NKD9 419 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 BANF1O75531 89 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 EIF2S1P05198 315 aaKnown RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 GRK2P25098 689 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 PRKAG1P54619 331 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 POLNQ7Z5Q5 900 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 CFAP52Q8N1V2 620 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 LZTR1Q8N653 840 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 OLFM3Q96PB7 478 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 TBCDQ9BTW9 1192 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 POLR1EQ9GZS1 481 aaKnown RBP11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 ASB8Q9H765 288 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 NOD2Q9HC29 1040 aa11.73□□□□□ -0.53
PCDHGA8-201ENST00000398604 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms