RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 DYNC1LI2O43237 492 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 PGK2P07205 417 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 UNGP13051 313 aaPredicted RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 USP46P62068 366 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 MRPL28Q13084 256 aaKnown RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 SQLEQ14534 574 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 NR6A1Q15406 480 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ZC3H12BQ5HYM0 836 aaKnown RBP11.25□□□□□ -0.61
HPS4-202ENST00000398145 ANKS6Q68DC2 871 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ZNF554Q86TJ5 538 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 FAM126BQ8IXS8 530 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 PLEKHG4BQ96PX9 1271 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 TMEM161AQ9NX61 479 aa11.25□□□□□ -0.61
HPS4-202ENST00000398145 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
HPS4-202ENST00000398145 SNAP91O60641 907 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 SLC2A3P11169 496 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 NELFEP18615 380 aaKnown RBP11.24□□□□□ -0.61
HPS4-202ENST00000398145 RECQLP46063 649 aaPredicted RBP11.24□□□□□ -0.61
HPS4-202ENST00000398145 MAP3K7CLP57077 242 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 SERAC1Q96JX3 654 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 ASB2Q96Q27 587 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TCF12Q99081 682 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 SYT15Q9BQS2 421 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 DGCR6LQ9BY27 220 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 GIMAP4Q9NUV9 329 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TBC1D13Q9NVG8 400 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 ZNF862O60290 1169 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 GSNP06396 782 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 ECHS1P30084 290 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 GPR107Q5VW38 600 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TTC23Q5W5X9 447 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 RRM2BQ7LG56 351 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 NT5DC4Q86YG4 428 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 RDH11Q8TC12 318 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 MTG1Q9BT17 334 aaPredicted RBP11.24□□□□□ -0.61
HPS4-202ENST00000398145 LHX5Q9H2C1 402 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TUBGCP4Q9UGJ1 667 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 POMPQ9Y244 141 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 H3BNX3 289 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 C2P06681 752 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 CPB1P15086 417 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TNFSF9P41273 254 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 AQP4P55087 323 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TWF1Q12792 350 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 NR1D2Q14995 579 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 DGUOKQ16854 277 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 UGT3A1Q6NUS8 523 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 DSELQ8IZU8 1212 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 EID3Q8N140 333 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 ATG16L2Q8NAA4 619 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 LGMNQ99538 433 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 BCAS3Q9H6U6 928 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 PCDH18Q9HCL0 1135 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
HPS4-202ENST00000398145 SQORQ9Y6N5 450 aa11.24□□□□□ -0.61
HPS4-202ENST00000398145 CCDC154A6NI56 674 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 C4BPAP04003 597 aaKnown RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 YBX3P16989 372 aaKnown RBP eCLIP11.23□□□□□ -0.61
HPS4-202ENST00000398145 SOX6P35712 828 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 CCT8P50990 548 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 SATL1Q86VE3 508 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 FBXO39Q8N4B4 442 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 SLC2A14Q8TDB8 520 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 FIG4Q92562 907 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 BORCS5Q969J3 196 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 LENG8Q96PV6 779 aaPredicted RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 TUBGCP5Q96RT8 1024 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 UGT2B28Q9BY64 529 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ATXN3LQ9H3M9 355 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ZMYND8Q9ULU4 1186 aaPredicted RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 A0A087X1B8 175 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 C2orf81A6NN90 581 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 PMM2O15305 246 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 CCR1P32246 355 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 PSEN1P49768 467 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 RALGPS1Q5JS13 557 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 PLD5Q8N7P1 536 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 FNDC5Q8NAU1 212 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 ITFG1Q8TB96 612 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 KCTD4Q8WVF5 259 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 FAM120BQ96EK7 910 aaKnown RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 CPXM1Q96SM3 734 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 RGS18Q9NS28 235 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 WWOXQ9NZC7 414 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 XPR1Q9UBH6 696 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 LIMD1Q9UGP4 676 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 DHRS12A0PJE2 317 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 PLIN3O60664 434 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 LBPP18428 481 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 CCNA2P20248 432 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 NEK3P51956 506 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 LRRC74AQ0VAA2 488 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 EPS8Q12929 822 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 DPYSQ14117 519 aa11.23□□□□□ -0.61
HPS4-202ENST00000398145 MAPRE1Q15691 268 aaKnown RBP11.23□□□□□ -0.61
HPS4-202ENST00000398145 BROXQ5VW32 411 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms