RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 DNAJC12Q9UKB3 198 aa14.7□□□□□ -0.06
SNRNP25-203ENST00000397876 LHX6Q9UPM6 363 aa14.7□□□□□ -0.06
SNRNP25-203ENST00000397876 HS3ST4Q9Y661 456 aa14.7□□□□□ -0.06
SNRNP25-203ENST00000397876 PTPRBP23467 1997 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3DA0A087WVF3 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3IA0A087WXS9 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3EA0A087X179 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3KA0A087X1G2 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3FA6NER0 549 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3LB9A6J9 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 C1QTNF3-AMACRE9PGA6 284 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 M0QYT0 321 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TAF4O00268 1085 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 SLC7A4O43246 635 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 CLDN11O75508 207 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 WNT1P04628 370 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3HP0C7X1 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 NOS2P35228 1153 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 DRD3P35462 400 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 GGCXP38435 758 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 BPIFB4P59827 614 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 SLC6A3Q01959 620 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 ACCSLQ4AC99 568 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 CCDC157Q569K6 752 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3GQ6DHY5 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3CQ6IPX1 549 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 SLC47A2Q86VL8 602 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D3Q8IZP1 549 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 ZNF397Q8NF99 534 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 FEM1AQ9BSK4 669 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 PDCL3Q9H2J4 239 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 KDM4CQ9H3R0 1056 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 SIX2Q9NPC8 291 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 AJAP1Q9UKB5 411 aaPredicted RBP14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 STAP1Q9ULZ2 295 aa14.69□□□□□ -0.06
SNRNP25-203ENST00000397876 PLXNB3Q9ULL4 1909 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 DMXL2Q8TDJ6 3036 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 A0A1W2PR77 199 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 C10orf142B7Z368 130 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 ALOX15BO15296 676 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 ATP9BO43861 1147 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PAGE1O75459 146 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 ITGAVP06756 1048 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PNMA6AP0CW24 399 aaPredicted RBP14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 NUDT1P36639 197 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 ARRB1P49407 418 aaPredicted RBP14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 IRAK1P51617 712 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 CDH4P55283 916 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PPP2CBP62714 309 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PPP2CAP67775 309 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 BRMS1LQ5PSV4 323 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 NAPEPLDQ6IQ20 393 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PRPF39Q86UA1 669 aaKnown RBP14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 GATAD2AQ86YP4 633 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 OXR1Q8N573 874 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 FAM131CQ96AQ9 280 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 ALG14Q96F25 216 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 MUC3BQ9H195 1237 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PLCB1Q9NQ66 1216 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 PAXBP1Q9Y5B6 917 aa14.68□□□□□ -0.06
SNRNP25-203ENST00000397876 CACNA1GO43497 2377 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 COL5A1P20908 1838 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 DSPP15924 2871 aaKnown RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 FOXN3O00409 490 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 LATO43561 262 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 PLRG1O43660 514 aaKnown RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 RTN2O75298 545 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 RHOCP08134 193 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 PRKCSHP14314 528 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 ZNF18P17022 549 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 EPHA8P29322 1005 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 CLCN1P35523 988 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 SULT1E1P49888 294 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 METAP1P53582 386 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 NXPH1P58417 271 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 KRT83P78385 493 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 DLG2Q15700 870 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 PRAMEF14Q5SWL7 426 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 OTUD1Q5VV17 481 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 Q6ZVU0 165 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 FAM71AQ8IYT1 594 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 TMEM35BQ8NCS4 154 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 OR52K2Q8NGK3 314 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 PIP4K2CQ8TBX8 421 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 MDM1Q8TC05 714 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 CCDC114Q96M63 670 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 NPY6RQ99463 290 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 C2orf49Q9BVC5 232 aaPredicted RBP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 TKTL2Q9H0I9 626 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 SIK2Q9H0K1 926 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 NDST4Q9H3R1 872 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 WDCPQ9H6R7 721 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 PIGVQ9NUD9 493 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 DMTF1Q9Y222 760 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 TBC1D30Q9Y2I9 924 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 OR51B4Q9Y5P0 310 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 FREM2Q5SZK8 3169 aa14.67□□□□□ -0.06
SNRNP25-203ENST00000397876 TLR4O00206 839 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms