RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 ILVBLA1L0T0 632 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 EEF2KO00418 725 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 MTA2O94776 668 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 SRPRAP08240 638 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 HTR7P34969 479 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 NBL1P41271 181 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 STK19P49842 368 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 GSDMDP57764 484 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 GNA12Q03113 381 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 MESDQ14696 234 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 BOLA3Q53S33 107 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 TXNRD3NBQ6F5E7 133 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 ZNF783Q6ZMS7 281 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 RTL3Q8N8U3 475 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 DCAF4L2Q8NA75 395 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 C2orf49Q9BVC5 232 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 CATSPERBQ9H7T0 1116 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 TFR2Q9UP52 801 aa21.73■■□□□ 1.07
TSPAN4-206ENST00000397408 FGF10O15520 208 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 SNAP91O60641 907 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 LILRB5O75023 590 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 RARAP10276 462 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 GABRG2P18507 467 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 MAN1A1P33908 653 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 GJC1P36383 396 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 SRSF5Q13243 272 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 HADHQ16836 314 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 PGBD3Q8N328 593 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 KDM1BQ8NB78 822 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 TEKT4Q8WW24 435 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 SPON2Q9BUD6 331 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 VPS51Q9UID3 782 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 SLCO3A1Q9UIG8 710 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 SLC25A13Q9UJS0 675 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 ZBTB24O43167 697 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 GOT1P17174 413 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 NDUFV2P19404 249 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 KRT83P78385 493 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 DPYSL2Q16555 572 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 RFX8Q6ZV50 586 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 ACRBPQ8NEB7 543 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 PHOX2BQ99453 314 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 SLC6A17Q9H1V8 727 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 MTG2Q9H4K7 406 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 ATP13A1Q9HD20 1204 aa21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 REXO2Q9Y3B8 237 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-206ENST00000397408 EML5Q05BV3 1969 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 WASH4PA8MWX3 477 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 TTC34A8MYJ7 566 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 RAMP2O60895 175 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 ACVRL1P37023 503 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 ETFBP38117 255 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 NNMTP40261 264 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 ARHGAP25P42331 645 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 TCEAL1Q15170 157 aa21.71■■□□□ 1.07
TSPAN4-206ENST00000397408 H3BRJ5 948 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 CBX4O00257 560 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 DAPK3O43293 454 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 GLDCP23378 1020 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 NOP2P46087 812 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 ZNF135P52742 658 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 TAS2R40P59535 323 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 CAMK2GQ13555 558 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 HNRNPA1L2Q32P51 320 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 IL31Q6EBC2 164 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 MRGPRX1Q96LB2 322 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 MKRN2Q9H000 416 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 MAGEH1Q9H213 219 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 PRSS16Q9NQE7 514 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 CWC15Q9P013 229 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 SUN2Q9UH99 717 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 CHD5Q8TDI0 1954 aa21.7■■□□□ 1.06
TSPAN4-206ENST00000397408 HRO43593 1189 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 RPP40O75818 363 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 CNR2P34972 360 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 ARL4AP40617 200 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 KRT81Q14533 505 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 POLD3Q15054 466 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 KIAA1324Q6UXG2 1013 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 LINGO4Q6UY18 593 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 CACUL1Q86Y37 369 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 OR2T3Q8NH03 318 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 GAB3Q8WWW8 586 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 ARHGEF2Q92974 986 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 NOL6Q9H6R4 1146 aaKnown RBP21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 PCDH18Q9HCL0 1135 aa21.69■■□□□ 1.06
TSPAN4-206ENST00000397408 EDDM13A0A1B0GTR0 161 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 RCCD1A6NED2 376 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 SIN3BO75182 1162 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 ERCC2P18074 760 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 VASPP50552 380 aaPredicted RBP21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 COPAP53621 1224 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 HADHBP55084 474 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 CDH6P55285 790 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 DPYSQ14117 519 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 USP39Q53GS9 565 aaKnown RBP21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 POLNQ7Z5Q5 900 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 TMPRSS6Q8IU80 811 aa21.68■■□□□ 1.06
TSPAN4-206ENST00000397408 SH2D3CQ8N5H7 860 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms