RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 PRPF39Q86UA1 669 aaKnown RBP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 VASH2Q86V25 355 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 MMAAQ8IVH4 418 aaKnown RBP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TBC1D3Q8IZP1 549 aaPredicted RBP9.75□□□□□ -0.85
NEDD9-203ENST00000397378 SLC4A11Q8NBS3 891 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 KIAA0895Q8NCT3 520 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 FIBINQ8TAL6 211 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 TAS1R2Q8TE23 839 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 RNF139Q8WU17 664 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 MRGPRX3Q96LB0 322 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 FUCA2Q9BTY2 467 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 ULBP1Q9BZM6 244 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 SEPT10Q9P0V9 454 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 MTMR6Q9Y217 621 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 FRMD4BQ9Y2L6 1034 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 ITIH6Q6UXX5 1313 aa9.75□□□□□ -0.85
NEDD9-203ENST00000397378 NBASA2RRP1 2371 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ITPR2Q14571 2701 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 TRPM6Q9BX84 2022 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 CCDC187A0A096LP49 1063 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 EDDM13A0A1B0GTR0 161 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 CPED1A4D0V7 1026 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 XPO1O14980 1071 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 KLRC4O43908 158 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 TBL1XO60907 577 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 YEATS4O95619 227 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ADH1BP00325 375 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 SRPRAP08240 638 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 C5AR1P21730 350 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 MAT2AP31153 395 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 CSKP41240 450 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 RAD23BP54727 409 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 PPP2CBP62714 309 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 PPP2CAP67775 309 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 PPP3CAQ08209 521 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 KCNAB2Q13303 367 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF177Q13360 481 aaPredicted RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 MORC3Q14149 939 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 CDKN3Q16667 212 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 POM121L1PQ3SYA9 428 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 FAM133BQ5BKY9 247 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 NUGGCQ68CJ6 796 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 MSANTD2Q6P1R3 559 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 RFWD3Q6PCD5 774 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 INTS8Q75QN2 995 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 EFL1Q7Z2Z2 1120 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 MFN1Q8IWA4 741 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 UNC45BQ8IWX7 931 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 SCML4Q8N228 414 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 AADATQ8N5Z0 425 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 CCDC150Q8NCX0 1101 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 HTR3CQ8WXA8 447 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 NDRG1Q92597 394 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 AZIN2Q96A70 460 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 FAM131CQ96AQ9 280 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 FAM129BQ96TA1 746 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ZNF768Q9H5H4 540 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 SYNDIG1Q9H7V2 258 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 USP29Q9HBJ7 922 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ABCC13Q9NSE7 274 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 NLGN3Q9NZ94 848 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 ARHGAP20Q9P2F6 1191 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 INTS6Q9UL03 887 aaKnown RBP9.74□□□□□ -0.85
NEDD9-203ENST00000397378 DMTF1Q9Y222 760 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 TRAF3IP3Q9Y228 551 aa9.74□□□□□ -0.85
NEDD9-203ENST00000397378 LY6G6EA0A0G2JKS1 128 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 NEMP2A6NFY4 417 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 YJEFN3A6XGL0 299 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 E7ENQ6 273 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 TULP2O00295 520 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 PLD2O14939 933 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 MSI1O43347 362 aaKnown RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 ACSL4O60488 711 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 GIMD1P0DJR0 217 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 LIPCP11150 499 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 SLC6A4P31645 630 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 GCLMP48507 274 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 PSMD8P48556 350 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 SLC11A2P49281 568 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 MCCD1P59942 119 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 ADIGQ0VDE8 80 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 NFIL3Q16649 462 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 GUSBP11Q6P575 273 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 BORAQ6PGQ7 559 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 SRRM1Q8IYB3 904 aaKnown RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 HJURPQ8NCD3 748 aaPredicted RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 SSC4DQ8WTU2 575 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 EDEM1Q92611 657 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 KLHDC7BQ96G42 594 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 IPO9Q96P70 1041 aaKnown RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 DUSP23Q9BVJ7 150 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 UPF2Q9HAU5 1272 aaKnown RBP9.73□□□□□ -0.85
NEDD9-203ENST00000397378 LRRC4Q9HBW1 653 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 TMEM8AQ9HCN3 771 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 CNGB3Q9NQW8 809 aa9.73□□□□□ -0.85
NEDD9-203ENST00000397378 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms