RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 A0A1B0GTW7 788 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ILVBLA1L0T0 632 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 E9PAM4 449 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 TEX33O43247 280 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ATP9BO43861 1147 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 SIN3BO75182 1162 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 TPM3P06753 285 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 GZMAP12544 262 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ENGP17813 658 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 TNFAIP3P21580 790 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 C5AR1P21730 350 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 OR1E1P30953 314 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 PRKCIP41743 596 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 SLC20A2Q08357 652 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 NR1I3Q14994 352 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 CST6Q15828 149 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 C2CD6Q53TS8 623 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 SH3PXD2AQ5TCZ1 1133 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 FAM46CQ5VWP2 391 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ACAD10Q6JQN1 1059 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 IL27RAQ6UWB1 636 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 IRF2BP2Q7Z5L9 587 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ZNF683Q8IZ20 524 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 BAP1Q92560 729 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 NTAN1Q96AB6 310 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ALG14Q96F25 216 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 PCDHB18PQ96TA0 734 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 NCAPGQ9BPX3 1015 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 GTPBP2Q9BX10 602 aaKnown RBP14.32□□□□□ -0.12
SEC13-204ENST00000397099 ADAM33Q9BZ11 813 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 PABPC3Q9H361 631 aaKnown RBP14.32□□□□□ -0.12
SEC13-204ENST00000397099 KDM4CQ9H3R0 1056 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 ADAMTS1Q9UHI8 967 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 HS3ST2Q9Y278 367 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 OR51B4Q9Y5P0 310 aa14.32□□□□□ -0.12
SEC13-204ENST00000397099 BZW2Q9Y6E2 419 aaKnown RBP14.32□□□□□ -0.12
SEC13-204ENST00000397099 A0A1W2PQJ5 194 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 LRRC72A6NJI9 287 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 TTC34A8MYJ7 566 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 UPK3BL1B0FP48 263 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 UPK3BL2E5RIL1 263 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 ARHGAP33O14559 1287 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 CDX4O14627 284 aaPredicted RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 SEMA4FO95754 770 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 TFE3P19532 575 aaPredicted RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 GPD1P21695 349 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 MZF1P28698 734 aaPredicted RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 ADRA1BP35368 520 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 ZNF143P52747 638 aaPredicted RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 GEMIN4P57678 1058 aaKnown RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 ATP11AP98196 1134 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 ASIC2Q16515 512 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 CCDC14Q49A88 953 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 DCAF12L1Q5VU92 463 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 SFMBT2Q5VUG0 894 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 RETSATQ6NUM9 610 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 C14orf80Q86SX3 495 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 CIR1Q86X95 450 aaPredicted RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 FAM131BQ86XD5 332 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 HDDC3Q8N4P3 179 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 EMC1Q8N766 993 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 ZNF366Q8N895 744 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 DCAF4L2Q8NA75 395 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 OR8D1Q8WZ84 308 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 SYN2Q92777 582 aaPredicted RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 TRIM11Q96F44 468 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 RPL10LQ96L21 214 aaKnown RBP14.31□□□□□ -0.12
SEC13-204ENST00000397099 CNPY3Q9BT09 278 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 CD93Q9NPY3 652 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 FSCN3Q9NQT6 498 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 PARVAQ9NVD7 372 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 FBXL12Q9NXK8 326 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 OR12D3Q9UGF7 316 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 SLCO3A1Q9UIG8 710 aa14.31□□□□□ -0.12
SEC13-204ENST00000397099 LRRC53A6NM62 1247 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 EIF3CLB5ME19 914 aaKnown RBP14.3□□□□□ -0.12
SEC13-204ENST00000397099 C1QTNF3-AMACRE9PGA6 284 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 GIPC1O14908 333 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 SLC7A4O43246 635 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 SRGAP2O75044 1071 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 GOT1P17174 413 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 CSRP1P21291 193 aaKnown RBP14.3□□□□□ -0.12
SEC13-204ENST00000397099 SLC8A1P32418 973 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 HTR7P34969 479 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 RFC1P35251 1148 aaPredicted RBP14.3□□□□□ -0.12
SEC13-204ENST00000397099 NUDT1P36639 197 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 CTSOP43234 321 aaPredicted RBP14.3□□□□□ -0.12
SEC13-204ENST00000397099 MAPKAPK2P49137 400 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 KLHL30Q0D2K2 578 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 ZNF252P-AS1Q0IIN9 211 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 SCAPQ12770 1279 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 HNRNPDQ14103 355 aaKnown RBP14.3□□□□□ -0.12
SEC13-204ENST00000397099 TEAD4Q15561 434 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 ACCSLQ4AC99 568 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 TRNP1Q6NT89 227 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 DCUN1D2Q6PH85 259 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 VPS36Q86VN1 386 aa14.3□□□□□ -0.12
SEC13-204ENST00000397099 CACUL1Q86Y37 369 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms