RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 ZNF335Q9H4Z2 1342 aaPredicted RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 FAM131AQ6UXB0 335 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CDRT15Q96T59 188 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 MCIDASD6RGH6 385 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SPTLC1O15269 473 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ULK1O75385 1050 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 UPP2O95045 317 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ITIH1P19827 911 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 MAGEA12P43365 314 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SNRPFP62306 86 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 NFIAQ12857 509 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 VPS72Q15906 364 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 FAM187BQ17R55 369 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 HKDC1Q2TB90 917 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CIAPIN1Q6FI81 312 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 UBE2Q1Q7Z7E8 422 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SNX32Q86XE0 403 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 OR56A4Q8NGH8 313 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 TEX47Q8TBZ9 253 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 GIPC3Q8TF64 312 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 UCMAQ8WVF2 138 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SNX7Q9UNH6 387 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF232Q9UNY5 417 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 AP3M1Q9Y2T2 418 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 DIDO1Q9BTC0 2240 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CYP4B1P13584 511 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CRABP2P29373 138 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 FXR1P51114 621 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 NR1H2P55055 460 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 OXCT1P55809 520 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 LRRC69Q6ZNQ3 347 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SLC44A5Q8NCS7 719 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 LRRC20Q8TCA0 184 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 POMKQ9H5K3 350 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 PMF1-BGLAPU3KQ54 211 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 KBTBD13C9JR72 458 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ZW10O43264 779 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 FGFR1P11362 822 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 RARGP13631 454 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 RPL4P36578 427 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 GRIA3P42263 894 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 PKNOX1P55347 436 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CUL2Q13617 745 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 SULT1C3Q6IMI6 304 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF549Q6P9A3 640 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 NET1Q7Z628 596 aaPredicted RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 KCNMB4Q86W47 210 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 REXO5Q96IC2 774 aaKnown RBP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 THAP2Q9H0W7 228 aa10.49□□□□□ -0.73
COL4A4-201ENST00000396625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL4A4-201ENST00000396625 CCDC88AQ3V6T2 1871 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 NRKQ7Z2Y5 1582 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 MRASO14807 208 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 IFNA6P05013 189 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 GHRP10912 638 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 COX7A2P14406 83 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 ITGB6P18564 788 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 CDKL1Q00532 357 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 PLD1Q13393 1074 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TTC7BQ86TV6 843 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 SPAG16Q8N0X2 631 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 KMOO15229 486 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 PTPN5P54829 565 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 GRTP1Q5TC63 336 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 CDK5RAP1Q96SZ6 601 aaKnown RBP10.48□□□□□ -0.73
COL4A4-201ENST00000396625 A0A088AWK7 358 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 C15orf38-AP3S2A0A0A6YYH1 394 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 MSH4O15457 936 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 PROCP04070 461 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 ZNF10P21506 573 aaPredicted RBP10.48□□□□□ -0.73
COL4A4-201ENST00000396625 ROR2Q01974 943 aaKnown RBP10.48□□□□□ -0.73
COL4A4-201ENST00000396625 CBX3Q13185 183 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 GLRA4Q5JXX5 417 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 PTAR1Q7Z6K3 402 aaPredicted RBP10.48□□□□□ -0.73
COL4A4-201ENST00000396625 ARPINQ7Z6K5 226 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 SIRT2Q8IXJ6 389 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 VPS35Q96QK1 796 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 ADGRL3Q9HAR2 1447 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 MAGEB3O15480 346 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 PRKCEQ02156 737 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 WDR93Q6P2C0 686 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TXNDC11Q6PKC3 985 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TC2NQ8N9U0 490 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 SLC25A23Q9BV35 468 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 CST11Q9H112 138 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 NEUROD4Q9HD90 331 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM216Q9P0N5 145 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 SERPINA1P01009 418 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 MYL4P12829 197 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 SDC2P34741 201 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TUBA1BP68363 451 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM132BQ14DG7 1078 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 CBWD3Q5JTY5 395 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 CBWD5Q5RIA9 395 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TUBA1AQ71U36 451 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TNFAIP8L1Q8WVP5 186 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 TMEM159Q96B96 161 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 GMCL1Q96IK5 515 aa10.48□□□□□ -0.73
COL4A4-201ENST00000396625 RPRD1AQ96P16 312 aaPredicted RBP10.48□□□□□ -0.73
COL4A4-201ENST00000396625 WDR27A2RRH5 827 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms