RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 SRGAP2BP0DMP2 458 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 TPH1P17752 444 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 CALB2P22676 271 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 FLT3LGP49771 235 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 INHBEP58166 350 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 ITPRIPL1Q6GPH6 555 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 OVOS1Q6IE37 1185 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 ATXN7L3BQ96GX2 97 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 ARHGEF38Q9NXL2 777 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 MYLKQ15746 1914 aa16.92■□□□□ 0.3
TRIM39-205ENST00000396551 FNDC1Q4ZHG4 1894 aaPredicted RBP16.92■□□□□ 0.3
TRIM39-205ENST00000396551 GSC2O15499 205 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 TYK2P29597 1187 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 ABCG1P45844 678 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 CACNB2Q08289 660 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 OTOP3Q7RTS5 596 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 STRA8Q7Z7C7 330 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 USP33Q8TEY7 942 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 ZNF419Q96HQ0 510 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 VAT1Q99536 393 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 EBF4Q9BQW3 602 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 SIK2Q9H0K1 926 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 TAS2R1Q9NYW7 299 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 TXNDC16Q9P2K2 825 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 C15orf41Q9Y2V0 281 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 NYNRINQ9P2P1 1898 aaKnown RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 IRAK2O43187 625 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 B4GALT3O60512 393 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 LIMK2P53671 638 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 FRG1Q14331 258 aaKnown RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 TLDC1Q6P9B6 456 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 C10orf107Q8IVU9 208 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 ARHGAP12Q8IWW6 846 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 WWP1Q9H0M0 922 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 CHRAC1Q9NRG0 131 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 FRMPD3Q5JV73 1810 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 ARRB2P32121 409 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 INSCQ1MX18 579 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 HSP90AA5PQ58FG0 334 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 WASHC2DQ5SRD0 308 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 CCSAPQ6IQ19 270 aaPredicted RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 RWDD4Q6NW29 188 aaKnown RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 PLD6Q8N2A8 252 aaKnown RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 RNPEPL1Q9HAU8 725 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 PPARGC1AQ9UBK2 798 aaKnown RBP16.91■□□□□ 0.3
TRIM39-205ENST00000396551 DSEQ9UL01 958 aa16.91■□□□□ 0.3
TRIM39-205ENST00000396551 ESRRAP11474 423 aaPredicted RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 CCND3P30281 292 aaPredicted RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 CAP1Q01518 475 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 FSTL4Q6MZW2 842 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 KLHDC8BQ8IXV7 354 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 PPP1R14CQ8TAE6 165 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 ATP2A3Q93084 1043 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 SUSD3Q96L08 255 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 SFMBT1Q9UHJ3 866 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 ADAM28Q9UKQ2 775 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 MRPL42Q9Y6G3 142 aaKnown RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 TNFRSF10BO14763 440 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 MSI1O43347 362 aaKnown RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 SLC1A6P48664 564 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 NPY2RP49146 381 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 SLC5A3P53794 718 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 TRIM71Q2Q1W2 868 aaKnown RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 C4orf50Q6ZRC1 276 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 BEND5Q7L4P6 421 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 ZNF598Q86UK7 904 aaKnown RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 ACVR1CQ8NER5 493 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 CASP10Q92851 521 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 TSGA13Q96PP4 275 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 MCMBPQ9BTE3 642 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 TRMT13Q9NUP7 481 aaKnown RBP16.9■□□□□ 0.3
TRIM39-205ENST00000396551 DNAJC16Q9Y2G8 782 aa16.9■□□□□ 0.3
TRIM39-205ENST00000396551 CACNG3O60359 315 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 DIAPH2O60879 1101 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 ENTPD5O75356 428 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 NMBRP28336 390 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 SPRP35270 261 aaPredicted RBP16.89■□□□□ 0.29
TRIM39-205ENST00000396551 SCD5Q86SK9 330 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 NSMCE1Q8WV22 266 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 SORT1Q99523 831 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 COPG2Q9UBF2 871 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 SOX13Q9UN79 622 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 DFFAO00273 331 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 GYG2O15488 501 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 PAGE1O75459 146 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 RPLP2P05387 115 aaKnown RBP16.89■□□□□ 0.29
TRIM39-205ENST00000396551 OR4Q2P0C623 313 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 CPA2P48052 419 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 FCGRTP55899 365 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 PRKCZQ05513 592 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 TUBB3Q13509 450 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 DLG2Q15700 870 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 MANEALQ5VSG8 457 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 KCNMB4Q86W47 210 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 SPATA22Q8NHS9 363 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 CCDC106Q9BWC9 280 aa16.89■□□□□ 0.29
TRIM39-205ENST00000396551 CAB39LQ9H9S4 337 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms