RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SULT2A1Q06520 285 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 ZNF234Q14588 700 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 PDK2Q15119 407 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 FNDC3BQ53EP0 1204 aaKnown RBP19.69■□□□□ 0.74
HOXA9-202ENST00000396345 MAP7D3Q8IWC1 876 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 RHOT1Q8IXI2 618 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 OR7D4Q8NG98 312 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 FAM71BQ8TC56 605 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 ZNF830Q96NB3 372 aaPredicted RBP19.69■□□□□ 0.74
HOXA9-202ENST00000396345 SPON2Q9BUD6 331 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 KLHL11Q9NVR0 708 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 POLR3BQ9NW08 1133 aaPredicted RBP19.69■□□□□ 0.74
HOXA9-202ENST00000396345 SLC8A2Q9UPR5 921 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 ERVW-1Q9UQF0 538 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 STON1Q9Y6Q2 735 aa19.69■□□□□ 0.74
HOXA9-202ENST00000396345 KRT86O43790 486 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 RAMP2O60895 175 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 SRPRAP08240 638 aaKnown RBP19.68■□□□□ 0.74
HOXA9-202ENST00000396345 ERCC2P18074 760 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 IL12RB1P42701 662 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 ARSEP51690 589 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 DPYSQ14117 519 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 POLD3Q15054 466 aaPredicted RBP19.68■□□□□ 0.74
HOXA9-202ENST00000396345 PTPRNQ16849 979 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 KIAA1524Q8TCG1 905 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 TSC1Q92574 1164 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 CSPG4P5Q96PW8 444 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 PSMB7Q99436 277 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 GABRG3Q99928 467 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 C2orf49Q9BVC5 232 aaPredicted RBP19.68■□□□□ 0.74
HOXA9-202ENST00000396345 MAGEH1Q9H213 219 aa19.68■□□□□ 0.74
HOXA9-202ENST00000396345 RCOR3Q9P2K3 495 aaPredicted RBP19.68■□□□□ 0.74
HOXA9-202ENST00000396345 WASH3PC4AMC7 463 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 PSTPIP1O43586 416 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 PAPSS2O95340 614 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-202ENST00000396345 CD48P09326 243 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 HOXB2P14652 356 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 AMPD1P23109 780 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 ETFBP38117 255 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 ST8SIA6P61647 398 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 CCDC173Q0VFZ6 552 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 MMRN1Q13201 1228 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 DPYSL3Q14195 570 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 SERPINA13PQ6UXR4 307 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 UMODL1-AS1Q8N2C9 162 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 RNF10Q8N5U6 811 aaKnown RBP19.67■□□□□ 0.74
HOXA9-202ENST00000396345 RAPGEF5Q92565 580 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 ARHGEF2Q92974 986 aaKnown RBP19.67■□□□□ 0.74
HOXA9-202ENST00000396345 CALN1Q9BXU9 219 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 KCNF1Q9H3M0 494 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 NOL6Q9H6R4 1146 aaKnown RBP19.67■□□□□ 0.74
HOXA9-202ENST00000396345 ATP13A1Q9HD20 1204 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 PRMT8Q9NR22 394 aaPredicted RBP19.67■□□□□ 0.74
HOXA9-202ENST00000396345 DDX56Q9NY93 547 aaKnown RBP19.67■□□□□ 0.74
HOXA9-202ENST00000396345 SLC25A13Q9UJS0 675 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 GUCA1BQ9UMX6 200 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 PPP2R2CQ9Y2T4 447 aa19.67■□□□□ 0.74
HOXA9-202ENST00000396345 GRID2IPA4D2P6 1211 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 SNAP91O60641 907 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 KRT1P04264 644 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 KDELR1P24390 212 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 IL4RP24394 825 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 ACVRL1P37023 503 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 YBEYP58557 167 aaPredicted RBP19.66■□□□□ 0.74
HOXA9-202ENST00000396345 CSTF1Q05048 431 aaKnown RBP19.66■□□□□ 0.74
HOXA9-202ENST00000396345 ENPP2Q13822 863 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 ANGPT1Q15389 498 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 CRY1Q16526 586 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 ODF2Q5BJF6 829 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 IL31Q6EBC2 164 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 TMEM92Q6UXU6 159 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 MAML2Q8IZL2 1156 aaPredicted RBP19.66■□□□□ 0.74
HOXA9-202ENST00000396345 LRRC57Q8N9N7 239 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 DCAF4L2Q8NA75 395 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 KDM1BQ8NB78 822 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 RPL10LQ96L21 214 aaKnown RBP19.66■□□□□ 0.74
HOXA9-202ENST00000396345 MRGPRX3Q96LB0 322 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 PRRX2Q99811 253 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 ZNF670Q9BS34 389 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 VPS51Q9UID3 782 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 FBXO4Q9UKT5 387 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 CHD5Q8TDI0 1954 aa19.66■□□□□ 0.74
HOXA9-202ENST00000396345 MUC22E2RYF6 1773 aaPredicted RBP19.65■□□□□ 0.74
HOXA9-202ENST00000396345 LRRD1A4D1F6 860 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 RASA4BC9J798 803 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 CBX4O00257 560 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 DCLK1O15075 740 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 RASA4O43374 803 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 PALMO75781 387 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 EPHX1P07099 455 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 GLDCP23378 1020 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 PRKCHP24723 683 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 NNMTP40261 264 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 STK19P49842 368 aaPredicted RBP19.65■□□□□ 0.74
HOXA9-202ENST00000396345 DGKEP52429 567 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 NDST2P52849 883 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 PARP15Q460N3 678 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 ANKRD20A8PQ5CZ79 823 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 ZNF662Q6ZS27 426 aa19.65■□□□□ 0.74
HOXA9-202ENST00000396345 ZNF354CQ86Y25 554 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms