RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 KCTD11Q693B1 232 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 SH2D5Q6ZV89 423 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 CYS1Q717R9 158 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 MIB1Q86YT6 1006 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 RTL3Q8N8U3 475 aaKnown RBP12.41□□□□□ -0.42
ITGB1-202ENST00000396033 DPF3Q92784 378 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 TLR8Q9NR97 1041 aaKnown RBP12.41□□□□□ -0.42
ITGB1-202ENST00000396033 BFARQ9NZS9 450 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 SLC17A6Q9P2U8 582 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 RPS6KL1Q9Y6S9 549 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 SKAP2O75563 359 aaPredicted RBP12.41□□□□□ -0.42
ITGB1-202ENST00000396033 VNN2O95498 520 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 TBX18O95935 607 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 CXCL10P02778 98 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 CCNB1P14635 433 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 ELF1P32519 619 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 NRG1Q02297 640 aaPredicted RBP12.41□□□□□ -0.42
ITGB1-202ENST00000396033 DUSP4Q13115 394 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 CES3Q6UWW8 571 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 FAM43BQ6ZT52 329 aaPredicted RBP12.41□□□□□ -0.42
ITGB1-202ENST00000396033 MARK2Q7KZI7 788 aaKnown RBP12.41□□□□□ -0.42
ITGB1-202ENST00000396033 RASSF3Q86WH2 238 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 CCT6BQ92526 530 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 GRAMD1AQ96CP6 724 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 TSGA13Q96PP4 275 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 FAM111AQ96PZ2 611 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 APOL2Q9BQE5 337 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 CASS4Q9NQ75 786 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 PHTF1Q9UMS5 762 aa12.41□□□□□ -0.42
ITGB1-202ENST00000396033 FAM92AA1XBS5 289 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 TBC1D4O60343 1298 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 HAPLN1P10915 354 aaPredicted RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 MLLT6P55198 1093 aaPredicted RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 NIPAL4Q0D2K0 466 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 SMARCB1Q12824 385 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 C10orf120Q5SQS8 335 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 OTOP3Q7RTS5 596 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 SLCO1B3Q9NPD5 702 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 OLA1Q9NTK5 396 aaKnown RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 CLIC5Q9NZA1 410 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 MAGED2Q9UNF1 606 aaPredicted RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 CDY1Q9Y6F8 540 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 PSMD5Q16401 504 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 SPANXN3Q5MJ09 141 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 ARTNQ5T4W7 220 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 CNTD1Q8N815 330 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 ZSCAN18Q8TBC5 510 aaPredicted RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 GIPC2Q8TF65 315 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 ZNF75CPQ92670 426 aaPredicted RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 SPATA17Q96L03 361 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 C1orf74Q96LT6 269 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 SRPK1Q96SB4 655 aaKnown RBP12.4□□□□□ -0.42
ITGB1-202ENST00000396033 SLC40A1Q9NP59 571 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 KLC4Q9NSK0 619 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 IL1RAPL1Q9NZN1 696 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 ARL2BPQ9Y2Y0 163 aa12.4□□□□□ -0.42
ITGB1-202ENST00000396033 MAFKO60675 156 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 TRIM60Q495X7 471 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 SLC39A5Q6ZMH5 540 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 ANKRD33Q7Z3H0 272 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 ATP6V0D2Q8N8Y2 350 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 N4BP2L2Q92802 583 aaPredicted RBP12.4□□□□□ -0.43
ITGB1-202ENST00000396033 ZNF669Q96BR6 464 aaPredicted RBP12.4□□□□□ -0.43
ITGB1-202ENST00000396033 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 ALG13Q9NP73 1137 aaKnown RBP12.4□□□□□ -0.43
ITGB1-202ENST00000396033 PCMTD2Q9NV79 361 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 MARCH2Q9P0N8 246 aa12.4□□□□□ -0.43
ITGB1-202ENST00000396033 FNDC1Q4ZHG4 1894 aaPredicted RBP12.4□□□□□ -0.43
ITGB1-202ENST00000396033 CLGNO14967 610 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 RFPL1O75677 317 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 HMBSP08397 361 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ALDH7A1P49419 539 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 RPL10AP62906 217 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 MGAT5Q09328 741 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 NAB1Q13506 487 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 TRIP4Q15650 581 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ACCSLQ4AC99 568 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 MS4A13Q5J8X5 152 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 RASIP1Q5U651 963 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.437e-7■■■□□ 16.4
ITGB1-202ENST00000396033 TFAP2DQ7Z6R9 452 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 CCDC63Q8NA47 563 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 C2orf15Q8WU43 125 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ZFATQ9P243 1243 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 STARD13Q9Y3M8 1113 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 EME2A4GXA9 379 aaPredicted RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 MATN3O15232 486 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 ATP9BO43861 1147 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 KIF1CO43896 1103 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 EDF1O60869 148 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 NEBLO76041 1014 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
ITGB1-202ENST00000396033 CNTFP26441 200 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 CCNFP41002 786 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 TLE2Q04725 743 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 NAPEPLDQ6IQ20 393 aa12.39□□□□□ -0.43
ITGB1-202ENST00000396033 TIGD7Q6NT04 549 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms