RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 PABPC1P11940 636 aaKnown RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 C15orf52Q6ZUT6 534 aaKnown RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 DPP10Q8N608 796 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 ALLCQ8N6M5 410 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 RNF145Q96MT1 663 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 RERGLQ9H628 205 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 LRRC19Q9H756 370 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 TNPO3Q9Y5L0 923 aaKnown RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 SNX8Q9Y5X2 465 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 C4BPBP20851 252 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 ALDH9A1P49189 494 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 NEK3P51956 506 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 XRCC4Q13426 336 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 SLC39A12Q504Y0 691 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 SEMA4DQ92854 862 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 PGLYRP2Q96PD5 576 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 MANSC4A6NHS7 340 aaPredicted RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 PDE2AO00408 941 aaPredicted RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 PTPN1P18031 435 aaKnown RBP17.64■□□□□ 0.41
UBFD1-201ENST00000395878 GLRA2P23416 452 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 BDNFP23560 247 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 HGH1Q9BTY7 390 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 VPS51Q9UID3 782 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 TPRKBQ9Y3C4 175 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 PCDHA11Q9Y5I1 949 aa17.64■□□□□ 0.41
UBFD1-201ENST00000395878 BMP10O95393 424 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 GUCA1AP43080 201 aaPredicted RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 DRG2P55039 364 aaKnown RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 ARMC12Q5T9G4 340 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 ZFPM1Q8IX07 1006 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 H3BMM5 538 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 TK2O00142 265 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 PROCP04070 461 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 CLTBP09497 229 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 WEE1P30291 646 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 FMO4P31512 558 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 AUHQ13825 339 aaKnown RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 IRGCQ6NXR0 463 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 CASP12Q6UXS9 341 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 STK32CQ86UX6 486 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 GLIS3Q8NEA6 775 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 ZBTB10Q96DT7 871 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 MAN1C1Q9NR34 630 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 CATSPERZQ9NTU4 200 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 OPTCQ9UBM4 332 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 UBIAD1Q9Y5Z9 338 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 USP12O75317 370 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 WBP4O75554 376 aaKnown RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 PCDH8O95206 1070 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 PPIL2Q13356 520 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 ATAD3BQ5T9A4 648 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 GPSM1Q86YR5 675 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 TMEM161BQ8NDZ6 487 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 PIWIL2Q8TC59 973 aaKnown RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 CCDC3Q9BQI4 270 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 RAD21L1Q9H4I0 556 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 A0A0B4J269 797 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 ANXA6P08133 673 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 TRIM71Q2Q1W2 868 aaKnown RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 AADACL2Q6P093 401 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 FOXR2Q6PJQ5 311 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 DHRSXQ8N5I4 330 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 PRCCQ92733 491 aaPredicted RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 PAPOLBQ9NRJ5 636 aaKnown RBP17.63■□□□□ 0.41
UBFD1-201ENST00000395878 SMPD4Q9NXE4 827 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 OR12D3Q9UGF7 316 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 ZNF112Q9UJU3 913 aa17.63■□□□□ 0.41
UBFD1-201ENST00000395878 CD3EAPO15446 510 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 PHGDHO43175 533 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 SNX3O60493 162 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 ABCB1P08183 1280 aaPredicted RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 GRIK3Q13003 919 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 C15orf59Q2T9L4 293 aaPredicted RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 TYW3Q6IPR3 259 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 CYP2R1Q6VVX0 501 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 YTHDF3Q7Z739 585 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 PHF13Q86YI8 300 aaPredicted RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 RIOX2Q8IUF8 465 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 RNF148Q8N7C7 305 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 SHC3Q92529 594 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 PRDM4Q9UKN5 801 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 MEIS2O14770 477 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 TRUB2O95900 331 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 RPN2P04844 631 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 LTA4HP09960 611 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 PSMB4P28070 264 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 S100A3P33764 101 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 GPR15P49685 360 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 IL2P60568 153 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
UBFD1-201ENST00000395878 DEFB128Q7Z7B8 93 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 ITFG1Q8TB96 612 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 KIDINS220Q9ULH0 1771 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 HS6ST1O60243 411 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 ITGAVP06756 1048 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 GRK4P32298 578 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 FUKQ8N0W3 1084 aa17.62■□□□□ 0.41
UBFD1-201ENST00000395878 OR8H2Q8N162 312 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms