RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 SLC39A8Q9C0K1 460 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 SP110Q9HB58 689 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 ZNF212Q9UDV6 495 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 NEU2Q9Y3R4 380 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 DOCK6Q96HP0 2047 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 DOCK4Q8N1I0 1966 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 RASA4BC9J798 803 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 GFRA2O00451 464 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 RASA4O43374 803 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 TSPAN3O60637 253 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 CARSP49589 748 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 PAPOLAP51003 745 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 RENBPP51606 427 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 GNA12Q03113 381 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 SLC12A1Q13621 1099 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 HLTFQ14527 1009 aaKnown RBP eCLIP14.01□□□□□ -0.17
VAPB-202ENST00000395802 TRADDQ15628 312 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 FAM78AQ5JUQ0 283 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 TMCO4Q5TGY1 634 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 ITPRIPL1Q6GPH6 555 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 ARHGEF18Q6ZSZ5 1173 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 CEP128Q6ZU80 1094 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 MFN1Q8IWA4 741 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 ARHGAP12Q8IWW6 846 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 BBS5Q8N3I7 341 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 SMRP1Q8NCR6 262 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 OSCP1Q8WVF1 389 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 IFT81Q8WYA0 676 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 MSLNLQ96KJ4 702 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 TRIM51Q9BSJ1 452 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 FUT8Q9BYC5 575 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 TRIM31Q9BZY9 425 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 NDFIP2Q9NV92 336 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 DUS2Q9NX74 493 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 MTRF1LQ9UGC7 380 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 IPO11Q9UI26 975 aaKnown RBP14.01□□□□□ -0.17
VAPB-202ENST00000395802 CD207Q9UJ71 328 aa14.01□□□□□ -0.17
VAPB-202ENST00000395802 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14□□□□□ -0.17
VAPB-202ENST00000395802 A0A0A0MRY4 1105 aa14□□□□□ -0.17
VAPB-202ENST00000395802 TRDMT1O14717 391 aaKnown RBP14□□□□□ -0.17
VAPB-202ENST00000395802 MATN3O15232 486 aa14□□□□□ -0.17
VAPB-202ENST00000395802 GBP2P32456 591 aaPredicted RBP14□□□□□ -0.17
VAPB-202ENST00000395802 IFNAR2P48551 515 aa14□□□□□ -0.17
VAPB-202ENST00000395802 GDF10P55107 478 aa14□□□□□ -0.17
VAPB-202ENST00000395802 IL10RBQ08334 325 aa14□□□□□ -0.17
VAPB-202ENST00000395802 GPS1Q13098 491 aa14□□□□□ -0.17
VAPB-202ENST00000395802 HNRNPDQ14103 355 aaKnown RBP14□□□□□ -0.17
VAPB-202ENST00000395802 TPGS1Q6ZTW0 290 aa14□□□□□ -0.17
VAPB-202ENST00000395802 MTSS1LQ765P7 747 aa14□□□□□ -0.17
VAPB-202ENST00000395802 OTOP3Q7RTS5 596 aa14□□□□□ -0.17
VAPB-202ENST00000395802 CARNMT1Q8N4J0 409 aa14□□□□□ -0.17
VAPB-202ENST00000395802 IRF7Q92985 503 aa14□□□□□ -0.17
VAPB-202ENST00000395802 FAM161BQ96MY7 647 aa14□□□□□ -0.17
VAPB-202ENST00000395802 SPATA13Q96N96 652 aa14□□□□□ -0.17
VAPB-202ENST00000395802 MUC3BQ9H195 1237 aa14□□□□□ -0.17
VAPB-202ENST00000395802 SPHK2Q9NRA0 654 aa14□□□□□ -0.17
VAPB-202ENST00000395802 KIAA1522Q9P206 1035 aaPredicted RBP14□□□□□ -0.17
VAPB-202ENST00000395802 TPX2Q9ULW0 747 aaKnown RBP14□□□□□ -0.17
VAPB-202ENST00000395802 SNX24Q9Y343 169 aa14□□□□□ -0.17
VAPB-202ENST00000395802 NUP210Q8TEM1 1887 aaPredicted RBP14□□□□□ -0.17
VAPB-202ENST00000395802 C2orf16Q68DN1 1984 aa14□□□□□ -0.17
VAPB-202ENST00000395802 GOLGA6CA6NDK9 693 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 GOLGA6BA6NDN3 693 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ATP8B1O43520 1251 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 MAFKO60675 156 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 SASH3O75995 380 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 NFATC1O95644 943 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ADH1CP00326 375 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 GOLGA6DP0CG33 693 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 CCNB1P14635 433 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ECHS1P30084 290 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 LTBRP36941 435 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 FDFT1P37268 417 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 DLX2Q07687 328 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 SERINC3Q13530 473 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 PDGFRLQ15198 375 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 TRIP13Q15645 432 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 KCTD19Q17RG1 926 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 TEX44Q53QW1 395 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 IL31Q6EBC2 164 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 CIR1Q86X95 450 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 YAF2Q8IY57 180 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ADGRG2Q8IZP9 1017 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ARHGEF2Q92974 986 aaKnown RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 ATP2A3Q93084 1043 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 HMCESQ96FZ2 354 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 ZNF599Q96NL3 588 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 DPH5Q9H2P9 285 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 GOLGA6AQ9NYA3 693 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 MARK1Q9P0L2 795 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 SEPT10Q9P0V9 454 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 KLHL8Q9P2G9 620 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 NFU1Q9UMS0 254 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 CXorf51AA0A1B0GTR3 108 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 RNF103O00237 685 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 SOX1O00570 391 aaPredicted RBP13.99□□□□□ -0.17
VAPB-202ENST00000395802 MAP2K7O14733 419 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 LAMP2P13473 410 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 IRAK1P51617 712 aa13.99□□□□□ -0.17
VAPB-202ENST00000395802 GEMIN4P57678 1058 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms