RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 ASCL3Q9NQ33 180 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 USP25Q9UHP3 1055 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 TLR6Q9Y2C9 796 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 TRPM6Q9BX84 2022 aa16.33■□□□□ 0.2
SNCA-205ENST00000394991 FFAR2O15552 330 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 STX10O60499 249 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 CALCAP01258 141 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 TACR2P21452 398 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 NUDT1P36639 197 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 CNTN1Q12860 1018 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 DPYDQ12882 1025 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 LRMPQ12912 555 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 STAT4Q14765 748 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 EDRF1Q3B7T1 1238 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 TMEM145Q8NBT3 493 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 KCNE4Q8WWG9 221 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 KLHDC7BQ96G42 594 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 MYOCQ99972 504 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 MIS12Q9H081 205 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 KIAA1257Q9ULG3 409 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 NAALADL1Q9UQQ1 740 aa16.32■□□□□ 0.2
SNCA-205ENST00000394991 LY6G6EA0A0G2JKS1 128 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 B8ZZF3 427 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 PRAMEF26H0Y7S4 382 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 M0QYV0 167 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 RNF225M0QZC1 329 aaPredicted RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 KLK10O43240 276 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 USP12O75317 370 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 CSO75390 466 aaKnown RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 EPB41P11171 864 aaKnown RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 CKMT1AP12532 417 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 C6P13671 934 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 PDGFRAP16234 1089 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 BRD2P25440 801 aaKnown RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 LSSP48449 732 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 TAS2R38P59533 333 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 YWHAEP62258 255 aaKnown RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 NNTQ13423 1086 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 SETMARQ53H47 684 aaPredicted RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 DCAF17Q5H9S7 520 aaPredicted RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 CHSY1Q86X52 802 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 CIR1Q86X95 450 aaPredicted RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 SNRNP27Q8WVK2 155 aaKnown RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 OR8D1Q8WZ84 308 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
SNCA-205ENST00000394991 VCPIP1Q96JH7 1222 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 DEPDC7Q96QD5 511 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNCA-205ENST00000394991 CLMPQ9H6B4 373 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 POLR1BQ9H9Y6 1135 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 SSUH2Q9Y2M2 353 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 U3KQA8 63 aa16.31■□□□□ 0.2
SNCA-205ENST00000394991 A0A1W2PNU3 283 aaPredicted RBP16.3■□□□□ 0.2
SNCA-205ENST00000394991 PIAS2O75928 621 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 PAEPP09466 180 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 THEGLP0DJG4 465 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 KRT10P13645 584 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 PRLRP16471 622 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 CMA1P23946 247 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 ERVPABLB-1P60509 514 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 VAC14Q08AM6 782 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 KCNMA1Q12791 1236 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 PKP1Q13835 747 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 CNGA2Q16280 664 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 TCERG1LQ5VWI1 586 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 SYPL2Q5VXT5 272 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 HSCBQ8IWL3 235 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
SNCA-205ENST00000394991 LSMEM2Q8N112 164 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 KLK6Q92876 244 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 HSFY1Q96LI6 401 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 APOLD1Q96LR9 279 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 KLHL11Q9NVR0 708 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 PPM1HQ9ULR3 514 aa16.3■□□□□ 0.2
SNCA-205ENST00000394991 CETN3O15182 167 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 SLC31A1O15431 190 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 RNGTTO60942 597 aaKnown RBP16.29■□□□□ 0.2
SNCA-205ENST00000394991 FBXO21O94952 628 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
SNCA-205ENST00000394991 NNMTP40261 264 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 PLK1P53350 603 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 SLC12A1Q13621 1099 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 ZC3H12AQ5D1E8 599 aaKnown RBP16.29■□□□□ 0.2
SNCA-205ENST00000394991 CXorf57Q6NSI4 855 aaKnown RBP16.29■□□□□ 0.2
SNCA-205ENST00000394991 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
SNCA-205ENST00000394991 OR13H1Q8NG92 308 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 KAT5Q92993 513 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 SNX21Q969T3 373 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 NOX5Q96PH1 765 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 PREBQ9HCU5 417 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 FZD3Q9NPG1 666 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
SNCA-205ENST00000394991 ARHGAP6O43182 974 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 ATP9BO43861 1147 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 LZTS3O60299 673 aaPredicted RBP16.28■□□□□ 0.2
SNCA-205ENST00000394991 APOEP02649 317 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 SYKP43405 635 aa16.28■□□□□ 0.2
SNCA-205ENST00000394991 NDUFA8P51970 172 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms