RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DPYSL2Q16555 572 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 BOLA3Q53S33 107 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 RFX8Q6ZV50 586 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 PSTKQ8IV42 348 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 RTL3Q8N8U3 475 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 ZBTB44Q8NCP5 570 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 TEKT4Q8WW24 435 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 GOLPH3Q9H4A6 298 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 NOL6Q9H6R4 1146 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 LUC7LQ9NQ29 371 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 KLHL11Q9NVR0 708 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 CWC15Q9P013 229 aaKnown RBP20.42■□□□□ 0.86
SNCA-203ENST00000394986 BCCIPQ9P287 314 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNCA-203ENST00000394986 VPS51Q9UID3 782 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 SALL4Q9UJQ4 1053 aa20.42■□□□□ 0.86
SNCA-203ENST00000394986 A0A0U1RQJ8 604 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 TTC34A8MYJ7 566 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 AXIN1O15169 862 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 GABRG2P18507 467 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 HOXA6P31267 233 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 NRLP54845 237 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 ST8SIA6P61647 398 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 STARD3Q14849 445 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 HADHQ16836 314 aaKnown RBP20.41■□□□□ 0.86
SNCA-203ENST00000394986 LINGO4Q6UY18 593 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 LONP2Q86WA8 852 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 RASSF3Q86WH2 238 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 CACUL1Q86Y37 369 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 ATRIPQ8WXE1 791 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 FAM126AQ9BYI3 521 aaPredicted RBP20.41■□□□□ 0.86
SNCA-203ENST00000394986 LACRTQ9GZZ8 138 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 CATSPERBQ9H7T0 1116 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 ATP13A1Q9HD20 1204 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 LCMT1Q9UIC8 334 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 DUSP10Q9Y6W6 482 aa20.41■□□□□ 0.86
SNCA-203ENST00000394986 CBX4O00257 560 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 FGF10O15520 208 aaPredicted RBP20.4■□□□□ 0.86
SNCA-203ENST00000394986 DAPK3O43293 454 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 SYNCRIPO60506 623 aaKnown RBP20.4■□□□□ 0.86
SNCA-203ENST00000394986 RAMP2O60895 175 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 ALDH1A2O94788 518 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 MT-CO1P00395 513 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 SRPRAP08240 638 aaKnown RBP20.4■□□□□ 0.86
SNCA-203ENST00000394986 CD48P09326 243 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 NDUFV2P19404 249 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 ARHGAP25P42331 645 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 SULT2A1Q06520 285 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 WDR5BQ86VZ2 330 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 PGBD3Q8N328 593 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 DCAF4L2Q8NA75 395 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 NETO2Q8NC67 525 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 C2orf49Q9BVC5 232 aaPredicted RBP20.4■□□□□ 0.86
SNCA-203ENST00000394986 PCDH18Q9HCL0 1135 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 MFHAS1Q9Y4C4 1052 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 PCDHGA2Q9Y5H1 932 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 ACTL7AQ9Y615 435 aa20.4■□□□□ 0.86
SNCA-203ENST00000394986 MYO18AQ92614 2054 aaKnown RBP20.39■□□□□ 0.85
SNCA-203ENST00000394986 WASH4PA8MWX3 477 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 BUB1O43683 1085 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 BUB1BO60566 1050 aaPredicted RBP20.39■□□□□ 0.85
SNCA-203ENST00000394986 VAV1P15498 845 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 HTR7P34969 479 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 VAV2P52735 878 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 DPYSQ14117 519 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 KRT81Q14533 505 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 E2F5Q15329 346 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 IL31Q6EBC2 164 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 ZNF783Q6ZMS7 281 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 POLNQ7Z5Q5 900 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 ARHGEF2Q92974 986 aaKnown RBP20.39■□□□□ 0.85
SNCA-203ENST00000394986 CELF6Q96J87 481 aaKnown RBP20.39■□□□□ 0.85
SNCA-203ENST00000394986 PPP1R9BQ96SB3 815 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 MKRN2Q9H000 416 aaKnown RBP20.39■□□□□ 0.85
SNCA-203ENST00000394986 IRF2BPLQ9H1B7 796 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 PRSS16Q9NQE7 514 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 EBF1Q9UH73 591 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 SLC25A13Q9UJS0 675 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 INVSQ9Y283 1065 aa20.39■□□□□ 0.85
SNCA-203ENST00000394986 A0A0A6YYK5 440 aaPredicted RBP20.38■□□□□ 0.85
SNCA-203ENST00000394986 H3BRJ5 948 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 K7ERQ8 282 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 LILRB5O75023 590 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 ZMPSTE24O75844 475 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 TNNT1P13805 278 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 ERCC2P18074 760 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 MRE11P49959 708 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 COPAP53621 1224 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 HADHBP55084 474 aaKnown RBP20.38■□□□□ 0.85
SNCA-203ENST00000394986 CDH6P55285 790 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 KRT83P78385 493 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 MMRN1Q13201 1228 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 CAMK2GQ13555 558 aaPredicted RBP20.38■□□□□ 0.85
SNCA-203ENST00000394986 HNRNPA1L2Q32P51 320 aaKnown RBP20.38■□□□□ 0.85
SNCA-203ENST00000394986 LEKR1Q6ZMV7 388 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 KIAA1328Q86T90 577 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 CSPG4P5Q96PW8 444 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 ACE2Q9BYF1 805 aaPredicted RBP20.38■□□□□ 0.85
SNCA-203ENST00000394986 RETREG1Q9H6L5 497 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 CD93Q9NPY3 652 aa20.38■□□□□ 0.85
SNCA-203ENST00000394986 ETNK2Q9NVF9 386 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms