RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LGALS16A8MUM7 142 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 MEI4A8MW99 385 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FAM72CH0Y354 149 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 BCAT2O15382 392 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 TEX33O43247 280 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SMAD6O43541 496 aaKnown RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ATP9BO43861 1147 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF821O75541 412 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SEMA4FO95754 770 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 LSM8O95777 96 aaKnown RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 CTSLP07711 333 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SRPRAP08240 638 aaKnown RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SLC2A3P11169 496 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ACADMP11310 421 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 UNGP13051 313 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 GNSP15586 552 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ABCB4P21439 1286 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 MMP8P22894 467 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 GLDCP23378 1020 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SLC8A1P32418 973 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SOX5P35711 763 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SULT1E1P49888 294 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 VASPP50552 380 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 CDR2Q01850 454 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ZBTB16Q05516 673 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SLC14A1Q13336 389 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 CST6Q15828 149 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 KIF19Q2TAC6 998 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SLC25A52Q3SY17 297 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 CCDC14Q49A88 953 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SYCP2LQ5T4T6 812 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FAM102AQ5T9C2 384 aaPredicted RBP9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FAM72AQ5TYM5 149 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FAM72DQ6L9T8 149 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 NCEH1Q6PIU2 408 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 DBX2Q6ZNG2 339 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FAM72BQ86X60 149 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ZDHHC17Q8IUH5 632 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 CHCHD4Q8N4Q1 142 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 RNF34Q969K3 372 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 NOX5Q96PH1 765 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SYT11Q9BT88 431 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 BTBD1Q9H0C5 482 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 CAAP1Q9H8G2 361 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FBRSQ9HAH7 460 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 FBXL12Q9NXK8 326 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 SUSD2Q9UGT4 822 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ADAMTS1Q9UHI8 967 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 BTBD3Q9Y2F9 522 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ACTL7AQ9Y615 435 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 NUMA1Q14980 2115 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 ATRXP46100 2492 aa9.11□□□□□ -0.95
ATG4A-205ENST00000394892 NUP205Q92621 2012 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 AKAP13Q12802 2813 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 EDDM13A0A1B0GTR0 161 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 FAM221BA6H8Z2 402 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 C2CD4BA6NLJ0 364 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 ZMPSTE24O75844 475 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 FSBPO95073 299 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 CD160O95971 181 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 DNTTP04053 509 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 SRCP12931 536 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 HOXB3P14651 431 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 PSMD8P48556 350 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 CDH4P55283 916 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 PPP2CBP62714 309 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 PPP2CAP67775 309 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 MYL5Q02045 173 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 DEUP1Q05D60 604 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 SLC12A1Q13621 1099 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 SHBQ15464 509 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 TRIP6Q15654 476 aaKnown RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 DLG2Q15700 870 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 C15orf59Q2T9L4 293 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 HLA-BQ31612 363 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 BRMS1LQ5PSV4 323 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 PRAMEF14Q5SWL7 426 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 MANEALQ5VSG8 457 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 RNF219Q5W0B1 726 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 USP30Q70CQ3 517 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 ARCQ7LC44 396 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 TFAP2DQ7Z6R9 452 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 FAM131BQ86XD5 332 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 DNAAF5Q86Y56 855 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 ZNF557Q8N988 423 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 OR7D4Q8NG98 312 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 BAHD1Q8TBE0 780 aaPredicted RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 C1orf74Q96LT6 269 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 ERGIC2Q96RQ1 377 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 C11orf70Q9BRQ4 267 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 PCED1AQ9H1Q7 454 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 WDCPQ9H6R7 721 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 SYNCQ9H7C4 482 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 SGK2Q9HBY8 427 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 OSGEPQ9NPF4 335 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 METTL5Q9NRN9 209 aaKnown RBP9.1□□□□□ -0.95
ATG4A-205ENST00000394892 NDFIP2Q9NV92 336 aa9.1□□□□□ -0.95
ATG4A-205ENST00000394892 ANO10Q9NW15 660 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms