RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 VWA8A3KMH1 1905 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 BCLAF3A2AJT9 711 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 SLC38A8A6NNN8 435 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 F5H423 210 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 DCLK1O15075 740 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 PAGE1O75459 146 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 NEBLO76041 1014 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RTN3O95197 1032 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 GJB5O95377 273 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ACSL3O95573 720 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 URODP06132 367 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 DRD4P21917 467 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCND1P24385 295 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SEC24CP53992 1094 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 AIF1P55008 147 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 DSG1Q02413 1049 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CAV1Q03135 178 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 FPGSQ05932 587 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ZNF844Q08AG5 666 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 AP1B1Q10567 949 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 KYNUQ16719 465 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 SLC45A4Q5BKX6 768 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 C10orf120Q5SQS8 335 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RNASEH2BQ5TBB1 312 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 FAXCQ5TGI0 409 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 KCTD16Q68DU8 428 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 TTC19Q6DKK2 380 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 PIGWQ7Z7B1 504 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 HOOK3Q86VS8 718 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 C7orf61Q8IZ16 206 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ARHGAP18Q8N392 663 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ZCCHC9Q8N567 271 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 TEX9Q8N6V9 391 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 NPWQ8N729 165 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCDC197Q8NCU1 140 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCNYQ8ND76 341 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ZNF461Q8TAF7 563 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ZNF483Q8TF39 744 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 C2orf15Q8WU43 125 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 TFB1MQ8WVM0 346 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 CPT1BQ92523 772 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 FCRL2Q96LA5 508 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 C9orf72Q96LT7 481 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 RBM15Q96T37 977 aaKnown RBP eCLIP7.13□□□□□ -1.271e-12■■■■■ 30.1
RTN4-205ENST00000394609 OXCT2Q9BYC2 517 aaPredicted RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 CEP41Q9BYV8 373 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 FAM129AQ9BZQ8 928 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 CCSER2Q9H7U1 834 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 NOD2Q9HC29 1040 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 TLR8Q9NR97 1041 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 RAB6BQ9NRW1 208 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 ARHGEF38Q9NXL2 777 aa7.13□□□□□ -1.27
RTN4-205ENST00000394609 NOP53Q9NZM5 478 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 AFF4Q9UHB7 1163 aaKnown RBP7.13□□□□□ -1.27
RTN4-205ENST00000394609 COL4A6Q14031 1691 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 RANBP2P49792 3224 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 FAM92AA1XBS5 289 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 SMIM23A6NLE4 172 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 PRRG1O14668 218 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 RIPK2O43353 540 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 BANF1O75531 89 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 FGF18O76093 207 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 ABLIM3O94929 683 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 HMBSP08397 361 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 NUDT17P0C025 328 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 VAV1P15498 845 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 TUFMP49411 452 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 TBX4P57082 545 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 CLN3Q13286 438 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 PPIGQ13427 754 aaKnown RBP eCLIP7.12□□□□□ -1.27
RTN4-205ENST00000394609 FASTKD3Q14CZ7 662 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 MORF4L2Q15014 288 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 DBN1Q16643 649 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 TMEM240Q5SV17 173 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 DENND2CQ68D51 928 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 DDX53Q86TM3 631 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 CDKL3Q8IVW4 592 aaPredicted RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 PPIL6Q8IXY8 311 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 FIBCD1Q8N539 461 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 PRCCQ92733 491 aaPredicted RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 PGM2Q96G03 612 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 CELF6Q96J87 481 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 ZNF512Q96ME7 567 aaPredicted RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 SERPINB11Q96P15 392 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 OLFM3Q96PB7 478 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 ZNF317Q96PQ6 595 aaPredicted RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 QKIQ96PU8 341 aaKnown RBP eCLIP7.12□□□□□ -1.273e-7■■■■■ 51.5
RTN4-205ENST00000394609 TMEM109Q9BVC6 243 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 NSRP1Q9H0G5 558 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 STMN4Q9H169 189 aaPredicted RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 CDC42EP4Q9H3Q1 356 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 PRDM12Q9H4Q4 367 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 SAYSD1Q9NPB0 183 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 MRPL17Q9NRX2 175 aaKnown RBP7.12□□□□□ -1.27
RTN4-205ENST00000394609 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.12□□□□□ -1.27
RTN4-205ENST00000394609 HAUS2Q9NVX0 235 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 MARCH2Q9P0N8 246 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 SEPT10Q9P0V9 454 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 TLR6Q9Y2C9 796 aa7.12□□□□□ -1.27
RTN4-205ENST00000394609 PCDHB12Q9Y5F1 795 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms