RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 KYAT3Q6YP21 454 aaKnown RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 CLEC20AQ6ZU45 233 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 STRADAQ7RTN6 431 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 STRA8Q7Z7C7 330 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 LMNTD2Q8IXW0 634 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 USP33Q8TEY7 942 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 CELF6Q96J87 481 aaKnown RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 NPY6RQ99463 290 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 MMADHCQ9H3L0 296 aaPredicted RBP13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 CHRAC1Q9NRG0 131 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 COPG2Q9UBF2 871 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 NUP205Q92621 2012 aa13.79□□□□□ -0.2
GTF2F1-201ENST00000394456 GLRA3O75311 464 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 CHRNA1P02708 482 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 CHRNGP07510 517 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 FDFT1P37268 417 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 TKTL1P51854 596 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 INHBEP58166 350 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 CAP1Q01518 475 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 IFRD2Q12894 506 aaPredicted RBP13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 TCHHL1Q5QJ38 904 aaPredicted RBP13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 FSTL4Q6MZW2 842 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 ISLR2Q6UXK2 745 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 IZUMO2Q6UXV1 221 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 MYLK4Q86YV6 388 aaPredicted RBP13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 SPATA6LQ8N4H0 392 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 MED10Q9BTT4 135 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 CRTAC1Q9NQ79 661 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 DCLK1O15075 740 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 DCXO43602 365 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 USP17L7P0C7H9 530 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 ZCCHC18P0CG32 403 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 RALBP11234 206 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 DESP17661 470 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 GJA9P57773 515 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 ACTR3P61158 418 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 PRKCZQ05513 592 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 LPCAT4Q643R3 524 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 FRMD7Q6ZUT3 714 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 ARCQ7LC44 396 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 PPP1R10Q96QC0 940 aaKnown RBP13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 DUSP16Q9BY84 665 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 MIOSQ9NXC5 875 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 TRPV2Q9Y5S1 764 aa13.78□□□□□ -0.2
GTF2F1-201ENST00000394456 CCDC189A1A4V9 331 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 ZNF487B1APH4 448 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 XPO1O14980 1071 aaKnown RBP13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 OPHN1O60890 802 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 SERPINE1P05121 402 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 ARSAP15289 507 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 MSX2P35548 267 aaPredicted RBP13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 AVPR1AP37288 418 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 SARNPP82979 210 aaKnown RBP13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 SREBF2Q12772 1141 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 ZNF460Q14592 562 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 MFSD14CQ5VZR4 134 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 HPS6Q86YV9 775 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 WDR75Q8IWA0 830 aaKnown RBP13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 DNAAF3Q8N9W5 541 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 OR52B2Q96RD2 323 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 PAAF1Q9BRP4 392 aa13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 WDR55Q9H6Y2 383 aaPredicted RBP13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 AGO3Q9H9G7 860 aaKnown RBP13.77□□□□□ -0.2
GTF2F1-201ENST00000394456 ZCWPW2A0A1B0GU75 182 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 NEMP1O14524 444 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 DAB1O75553 588 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 PTPN1P18031 435 aaKnown RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 AOC1P19801 751 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 GLRBP48167 497 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 ABCE1P61221 599 aaKnown RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 EFHC1Q5JVL4 640 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 PDPK2PQ6A1A2 396 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 OTOP3Q7RTS5 596 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 NET1Q7Z628 596 aaPredicted RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 WDR6Q9NNW5 1121 aaKnown RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 APOBEC2Q9Y235 224 aaKnown RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 PHGDHO43175 533 aaKnown RBP13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 MAP3K7O43318 606 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 CA12O43570 354 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 MLNP12872 115 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 CPA3P15088 417 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 NPR3P17342 541 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 NFKB1P19838 968 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 NMBRP28336 390 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 GLUD2P49448 558 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 CLCNKBP51801 687 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 FCGRTP55899 365 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 CCNIQ14094 377 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 PPM1LQ5SGD2 360 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 THEMIS2Q5TEJ8 643 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 OR52E8Q6IFG1 317 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
GTF2F1-201ENST00000394456 ZMIZ2Q8NF64 920 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms