RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 RPRD1AQ96P16 312 aaPredicted RBP19.48■□□□□ 0.71
CLDND1-203ENST00000394181 SYBUQ9NX95 663 aa19.48■□□□□ 0.71
CLDND1-203ENST00000394181 CDH23Q9H251 3354 aa19.48■□□□□ 0.71
CLDND1-203ENST00000394181 RANBP2P49792 3224 aaKnown RBP19.48■□□□□ 0.71
CLDND1-203ENST00000394181 J3KR12 359 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 MATN3O15232 486 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 AP2A1O95782 977 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 KLKB1P03952 638 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CNPP09543 421 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CSH1P0DML2 217 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CSH2P0DML3 217 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 SARNPP82979 210 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 TAF12Q16514 161 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CES3Q6UWW8 571 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CHSY1Q86X52 802 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 KLHL23Q8NBE8 558 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 LRRC39Q96DD0 335 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 EPN3Q9H201 632 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 TMEM248Q9NWD8 314 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 PPARGC1AQ9UBK2 798 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 NYNRINQ9P2P1 1898 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 LCHNA4D1U4 455 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 SDR42E2A6NKP2 422 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 DRGXA6NNA5 263 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 TRDMT1O14717 391 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 MT-CYBP00156 380 aaPredicted RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 MLNP12872 115 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 IFNAR2P48551 515 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 UMODL1-AS1Q8N2C9 162 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 MZB1Q8WU39 189 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 STAMBPL1Q96FJ0 436 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CEP295NLQ96MC4 621 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CYP2S1Q96SQ9 504 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 IL12RB2Q99665 862 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 ZBED2Q9BTP6 218 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 TRABDQ9H4I3 376 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 ZNF334Q9HCZ1 680 aaPredicted RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 INTS9Q9NV88 658 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 TRPM5Q9NZQ8 1165 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 HSFX1Q9UBD0 423 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 IPO11Q9UI26 975 aaKnown RBP19.47■□□□□ 0.71
CLDND1-203ENST00000394181 PCDHB12Q9Y5F1 795 aa19.47■□□□□ 0.71
CLDND1-203ENST00000394181 CHD9Q3L8U1 2897 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 PEX11BO96011 259 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 TACR2P21452 398 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 HTRA4P83105 476 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-203ENST00000394181 FAM133BQ5BKY9 247 aaKnown RBP19.46■□□□□ 0.71
CLDND1-203ENST00000394181 DENND1CQ8IV53 801 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 CTAGE3PQ8IX95 158 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 FIBCD1Q8N539 461 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 PPM1NQ8N819 430 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 VAT1Q99536 393 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 FAM107BQ9H098 131 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 ZBP1Q9H171 429 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 IL1RAPL1Q9NZN1 696 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 FETUBQ9UGM5 382 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 HBS1LQ9Y450 684 aaKnown RBP19.46■□□□□ 0.71
CLDND1-203ENST00000394181 PCDHA11Q9Y5I1 949 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 INSL5Q9Y5Q6 135 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 A6NNZ2 444 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 SCAMP3O14828 347 aaKnown RBP19.46■□□□□ 0.71
CLDND1-203ENST00000394181 SUN1O94901 812 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 HLA-DQB2P05538 268 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 TPH1P17752 444 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 ELF1P32519 619 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 ZNF33AQ06730 810 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 ZSCAN26Q16670 478 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 TUBB8Q3ZCM7 444 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 TCEAL8Q8IYN2 117 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 LGI2Q8N0V4 545 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 PDZD8Q8NEN9 1154 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 SLC44A1Q8WWI5 657 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 SLC22A12Q96S37 553 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 KLF6Q99612 283 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-203ENST00000394181 RBM22Q9NW64 420 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLDND1-203ENST00000394181 SLC17A6Q9P2U8 582 aa19.46■□□□□ 0.71
CLDND1-203ENST00000394181 KIAA1671Q9BY89 1806 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 TGM5O43548 720 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 IRF1P10914 325 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 PRKCHP24723 683 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 RASA2Q15283 850 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 TMEM240Q5SV17 173 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 NUGGCQ68CJ6 796 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 ITPRIPL1Q6GPH6 555 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 ZNF276Q8N554 614 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 OVCA2Q8WZ82 227 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 KLHL5Q96PQ7 755 aa19.45■□□□□ 0.7
CLDND1-203ENST00000394181 GOLGA8RI6L899 631 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 CACNG3O60359 315 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 ACSL4O60488 711 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 SPAG6O75602 509 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 SYN1P17600 705 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 STX2P32856 288 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 PPM1AP35813 382 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 FPGSQ05932 587 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 CERCAMQ5T4B2 595 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 SPRED2Q7Z698 418 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 GSDMBQ8TAX9 411 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 PSMG2Q969U7 264 aa19.44■□□□□ 0.7
CLDND1-203ENST00000394181 CENPTQ96BT3 561 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms