RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 E7ENQ6 273 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 GPR182O15218 404 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 PGM3O95394 542 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 SERPINE1P05121 402 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 FGFR1P11362 822 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 TSHRP16473 764 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 PAX3P23760 479 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 PTPN9P43378 593 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 DSG1Q02413 1049 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 INCA1Q0VD86 236 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 MGAT5BQ3V5L5 792 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 SDHAF4Q5VUM1 108 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 HFE2Q6ZVN8 426 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 FAM35AQ86V20 835 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 RELL1Q8IUW5 271 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 SPATA6LQ8N4H0 392 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 PIWIL2Q8TC59 973 aaKnown RBP10.75□□□□□ -0.69
CALD1-203ENST00000393118 PLEKHG4BQ96PX9 1271 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 CXCL16Q9H2A7 254 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 CATSPERBQ9H7T0 1116 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 ZNF232Q9UNY5 417 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 SOCS7O14512 581 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 TYROBPO43914 113 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 PSMD7P51665 324 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 CLCNKBP51801 687 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 STX1BP61266 288 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 SLC25A3Q00325 362 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 TRIP10Q15642 601 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 C4orf50Q6ZRC1 276 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 PSTKQ8IV42 348 aaKnown RBP10.75□□□□□ -0.69
CALD1-203ENST00000393118 C10orf107Q8IVU9 208 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 CMTM5Q96DZ9 223 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 DNAJC1Q96KC8 554 aaKnown RBP10.75□□□□□ -0.69
CALD1-203ENST00000393118 ILKAPQ9H0C8 392 aaPredicted RBP10.75□□□□□ -0.69
CALD1-203ENST00000393118 LRMDAQ9H2I8 198 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 ZFYVE28Q9HCC9 887 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 FAM105AQ9NUU6 356 aa10.75□□□□□ -0.69
CALD1-203ENST00000393118 TIMM44O43615 452 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 BNIP3LO60238 219 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 MAGEA8P43361 318 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 NUDT2P50583 147 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 CRYBB1P53674 252 aaPredicted RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 EFEMP1Q12805 493 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 UGP2Q16851 508 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 FAM110CQ1W6H9 321 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 KIF19Q2TAC6 998 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ZNF792Q3KQV3 632 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 HABP4Q5JVS0 413 aaKnown RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 ZNF567Q8N184 647 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 BBS5Q8N3I7 341 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 RNF148Q8N7C7 305 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 MFSD3Q96ES6 412 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 SERPINI1Q99574 410 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ADAM2Q99965 735 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 FAM192AQ9GZU8 254 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 SARS2Q9NP81 518 aaKnown RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 KCNK4Q9NYG8 393 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 BCAP29Q9UHQ4 241 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 PRR5-ARHGAP8B1AHC4 643 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ABL2P42684 1182 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ARHGAP8P85298 464 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ZNF235Q14590 738 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 PDPK2PQ6A1A2 396 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 TMPRSS6Q8IU80 811 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 MYLPFQ96A32 169 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 CLPTM1LQ96KA5 538 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 LRGUKQ96M69 825 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 QKIQ96PU8 341 aaKnown RBP eCLIP10.74□□□□□ -0.69
CALD1-203ENST00000393118 DENND2DQ9H6A0 471 aaPredicted RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ARHGEF3Q9NR81 526 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 PNPOQ9NVS9 261 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 DERAQ9Y315 318 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 RBM47A0AV96 593 aaKnown RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 ZBTB24O43167 697 aaPredicted RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 CD52P31358 61 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 SKIV2L2P42285 1042 aaKnown RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 TUBP50607 506 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 PLK1P53350 603 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 CDH17Q12864 832 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 DPYSL2Q16555 572 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 TCHHL1Q5QJ38 904 aaPredicted RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 LAYNQ6UX15 382 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 KYAT3Q6YP21 454 aaKnown RBP10.74□□□□□ -0.69
CALD1-203ENST00000393118 UBR7Q8N806 425 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 CASP10Q92851 521 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 RMDN1Q96DB5 314 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 NFKBIZQ9BYH8 718 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 USP29Q9HBJ7 922 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 SFMBT1Q9UHJ3 866 aa10.74□□□□□ -0.69
CALD1-203ENST00000393118 DNAJC25-GNG10A0A024R161 153 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
CALD1-203ENST00000393118 SPTLC1O15269 473 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 FAM189A1O60320 539 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 PROCP04070 461 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 BPGMP07738 259 aa10.73□□□□□ -0.69
CALD1-203ENST00000393118 AKR1A1P14550 325 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms