RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 ERCC2P18074 760 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 HCAR3P49019 387 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 COG7P83436 770 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 PDGFRLQ15198 375 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 EML3Q32P44 896 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 IZUMO3Q5VZ72 239 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 HTR3DQ70Z44 454 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 B4GALNT4Q76KP1 1039 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 UNC45BQ8IWX7 931 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 FBXO25Q8TCJ0 367 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 SLC39A13Q96H72 371 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 SIK2Q9H0K1 926 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 EBF3Q9H4W6 596 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 DUS2Q9NX74 493 aaKnown RBP13.93□□□□□ -0.18
PTN-202ENST00000393083 GTSE1Q9NYZ3 720 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 DTLQ9NZJ0 730 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 MTRF1LQ9UGC7 380 aaKnown RBP13.93□□□□□ -0.18
PTN-202ENST00000393083 FBXL21Q9UKT6 434 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 CA14Q9ULX7 337 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 COL4A2P08572 1712 aa13.93□□□□□ -0.18
PTN-202ENST00000393083 SLC12A8A0AV02 714 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 CFAP69A5D8W1 941 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 TMEM221A6NGB7 291 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 KCNU1A8MYU2 1149 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 M0R296 226 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 KLKB1P03952 638 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 HMBSP08397 361 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 IRF1P10914 325 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 ITIH2P19823 946 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 IVDP26440 423 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 ITGA8P53708 1063 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 SLC10A2Q12908 348 aaPredicted RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 GPS1Q13098 491 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 XRCC4Q13426 336 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 PAFAH1B3Q15102 231 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 P3H1Q32P28 736 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 Q6ZNB5 142 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 BZW1Q7L1Q6 419 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 ADGRG2Q8IZP9 1017 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 SIX5Q8N196 739 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 ATP6V0D2Q8N8Y2 350 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 FAM71DQ8N9W8 422 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 BBOF1Q8ND07 529 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 ART4Q93070 314 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 QKIQ96PU8 341 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTN-202ENST00000393083 ARHGEF3Q9NR81 526 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 HEBP1Q9NRV9 189 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 XPO7Q9UIA9 1087 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 SH3BP1Q9Y3L3 701 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 HBS1LQ9Y450 684 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 BCLAF3A2AJT9 711 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 DNALI1O14645 258 aaPredicted RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 MAP2K7O14733 419 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 KCNN4O15554 427 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 EPHB2P29323 1055 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 HTR7P34969 479 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 IFNAR2P48551 515 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 MLLT6P55198 1093 aaPredicted RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 STARD6P59095 220 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 RUNX3Q13761 415 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 MLF2Q15773 248 aaPredicted RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 SLC45A4Q5BKX6 768 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 MANEALQ5VSG8 457 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 RWDD4Q6NW29 188 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 BBS7Q8IWZ6 715 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 MREGQ8N565 214 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 CCDC33Q8N5R6 958 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 TSEN2Q8NCE0 465 aaKnown RBP13.92□□□□□ -0.18
PTN-202ENST00000393083 LRRC45Q96CN5 670 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 TBC1D31Q96DN5 1066 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 OLFM3Q96PB7 478 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 ECT2Q9H8V3 914 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 TBC1D14Q9P2M4 693 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 NEU3Q9UQ49 428 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 HS3ST4Q9Y661 456 aa13.92□□□□□ -0.18
PTN-202ENST00000393083 MYO18AQ92614 2054 aaKnown RBP13.91□□□□□ -0.18
PTN-202ENST00000393083 COL4A3Q01955 1670 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 HACD1B0YJ81 288 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 SLC9A3R1O14745 358 aaPredicted RBP13.91□□□□□ -0.18
PTN-202ENST00000393083 PDGFBP01127 241 aaPredicted RBP13.91□□□□□ -0.18
PTN-202ENST00000393083 IGLV3-27P01718 113 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 RBL1P28749 1068 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 STIP1P31948 543 aaKnown RBP13.91□□□□□ -0.18
PTN-202ENST00000393083 HSPA9P38646 679 aaKnown RBP13.91□□□□□ -0.18
PTN-202ENST00000393083 KPNA1P52294 538 aaPredicted RBP13.91□□□□□ -0.18
PTN-202ENST00000393083 CAV1Q03135 178 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 PRKCQQ04759 706 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 ITPRIPL2Q3MIP1 535 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 PIK3R6Q5UE93 754 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 TMC3Q7Z5M5 1100 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 BMP8AQ7Z5Y6 402 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 NETO2Q8NC67 525 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 TTC8Q8TAM2 541 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 CSGALNACT1Q8TDX6 532 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 LRRN4Q8WUT4 740 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 ATP2A3Q93084 1043 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 PLD4Q96BZ4 506 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 OTUB2Q96DC9 234 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 CHFRQ96EP1 664 aa13.91□□□□□ -0.18
PTN-202ENST00000393083 SLC12A6Q9UHW9 1150 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms