RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 CNTN5O94779 1100 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 NFKB1P19838 968 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 TACR2P21452 398 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 LSP1P33241 339 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 PAPOLAP51003 745 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 KCNQ1P51787 676 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 EFTUD2Q15029 972 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 TMEM240Q5SV17 173 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 DNAJB7Q7Z6W7 309 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 CHSY1Q86X52 802 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 CCNJLQ8IV13 435 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 CNTD1Q8N815 330 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 AZIN2Q96A70 460 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 PAFAH2Q99487 392 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZBED2Q9BTP6 218 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 RETREG1Q9H6L5 497 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 CXXC1Q9P0U4 656 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 TTLL3Q9Y4R7 772 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 CHD5Q8TDI0 1954 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 VGLL3A8MV65 326 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 ACSL4O60488 711 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 OAS1P00973 400 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 C1QAP02745 245 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 PRKCHP24723 683 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 MAPKAPK2P49137 400 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 HARS2P49590 506 aaKnown RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 PRPSAP1Q14558 356 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 ANO4Q32M45 955 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 STEAP4Q687X5 459 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 LEKR1Q6ZMV7 388 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 UNC5AQ6ZN44 842 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 CYS1Q717R9 158 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZNF771Q7L3S4 317 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 TFAP2DQ7Z6R9 452 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 ITIH5Q86UX2 942 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 TRABD2AQ86V40 505 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 MPP5Q8N3R9 675 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 KLHL23Q8NBE8 558 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 DCAKDQ8WVC6 231 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 STAMBPL1Q96FJ0 436 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 RPRD1AQ96P16 312 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 PPP1R2P1Q96PQ5 205 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 NAT9Q9BTE0 207 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 MLPHQ9BV36 600 aaPredicted RBP11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 SENP1Q9P0U3 644 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 PCDHA11Q9Y5I1 949 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 MAD1L1Q9Y6D9 718 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 DENND4CQ5VZ89 1909 aa11.7□□□□□ -0.54
SMARCAL1-203ENST00000392128 RASA4BC9J798 803 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 F5H5T6 163 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 PSMD3O43242 534 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 RASA4O43374 803 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 CNPP09543 421 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 CHN1P15882 459 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 MSH2P43246 934 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 IFNAR2P48551 515 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC11A2P49281 568 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 KBTBD12Q3ZCT8 623 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 GSDMBQ8TAX9 411 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 MDM1Q8TC05 714 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 RAD9AQ99638 391 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 LRRC40Q9H9A6 602 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 CASS4Q9NQ75 786 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 IPO11Q9UI26 975 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 GOLGA6L7A0A1B0GV03 622 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC20A2Q08357 652 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 PARP15Q460N3 678 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 FAM133BQ5BKY9 247 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 TMEM150AQ86TG1 271 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 HERC6Q8IVU3 1022 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 SRRM1Q8IYB3 904 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 PHOSPHO2Q8TCD6 241 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC44A1Q8WWI5 657 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 ARNTL2Q8WYA1 636 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 HERVK_113Q902F9 699 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 HMCESQ96FZ2 354 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 ZNF419Q96HQ0 510 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 FCRL5Q96RD9 977 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 MCOLN1Q9GZU1 580 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 AAR2Q9Y312 384 aaKnown RBP11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 ASB3Q9Y575 518 aa11.69□□□□□ -0.54
SMARCAL1-203ENST00000392128 TMEM120BA0PK00 339 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 FOXO6A8MYZ6 492 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 AP3B1O00203 1094 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 TGM5O43548 720 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 STC2O76061 302 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 PEX11BO96011 259 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 F11P03951 625 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 BRAFP15056 766 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 CREB1P16220 341 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 PGAM1P18669 254 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 MGAT1P26572 445 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 SLC6A4P31645 630 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 SESN2P58004 480 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 YBEYP58557 167 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 HNRNPDQ14103 355 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 SPARCL1Q14515 664 aa11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 PRPF39Q86UA1 669 aaKnown RBP11.68□□□□□ -0.54
SMARCAL1-203ENST00000392128 USP33Q8TEY7 942 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms