RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ALDH9A1P49189 494 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 CIAPIN1Q6FI81 312 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ARHGAP36Q6ZRI8 547 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 PIGUQ9H490 435 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 SAE1Q9UBE0 346 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 COQ6Q9Y2Z9 468 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ACTL7BQ9Y614 415 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 GAS2O43903 313 aaKnown RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 TXNP10599 105 aaKnown RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 COPZ1P61923 177 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 RNASE12Q5GAN4 147 aaKnown RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 FAM131BQ86XD5 332 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 SEMA4BQ9NPR2 832 aaPredicted RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 SYNPO2Q9UMS6 1093 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 PCDHGC5Q9Y5F6 944 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 TET3O43151 1660 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 LSM8O95777 96 aaKnown RBP16.41■□□□□ 0.22
SHANK1-204ENST00000391814 S100A6P06703 90 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 CLTBP09497 229 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ARF5P84085 180 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 BNC1Q01954 994 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 IL27RAQ6UWB1 636 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 SLITRK2Q9H156 845 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 TRPV5Q9NQA5 729 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 COMMD9Q9P000 198 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 IQGAP3Q86VI3 1631 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 A0A1W2PPM1 405 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 TIPRLO75663 272 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 CRADDP78560 199 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 BHMTQ93088 406 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 SIPA1Q96FS4 1042 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 ZFYVE28Q9HCC9 887 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 GIN1Q9NXP7 522 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 PCYOX1Q9UHG3 505 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 RAB26Q9ULW5 256 aa16.41■□□□□ 0.22
SHANK1-204ENST00000391814 TMEM114B3SHH9 223 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CSDE1O75534 798 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 OR6B1O95007 311 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 DARSP14868 501 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 SPESP1Q6UW49 350 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ABRAQ8N0Z2 381 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 DNAJC1Q96KC8 554 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ETNK2Q9NVF9 386 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 PFDN2Q9UHV9 154 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 DYRK1BQ9Y463 629 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CYP2C8P10632 490 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 NAB1Q13506 487 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 VEPH1Q14D04 833 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 OR56A4Q8NGH8 313 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CRISPLD1Q9H336 500 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ENOPH1Q9UHY7 261 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 MRPS7Q9Y2R9 242 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 PRR5-ARHGAP8B1AHC4 643 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 G3V2T6 193 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 DNM1LO00429 736 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ZC3H11AO75152 810 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 GRIA4P48058 902 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 BCAP31P51572 246 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ARHGAP8P85298 464 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 RIPK1Q13546 671 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CRTC3Q6UUV7 619 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ZNF621Q6ZSS3 439 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 TMEM110Q86TL2 294 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 RP9Q8TA86 221 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 DMRTB1Q96MA1 342 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 HGH1Q9BTY7 390 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CLPBQ9H078 707 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 MAPRE3Q9UPY8 281 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 SLC9A8Q9Y2E8 581 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 FARP2O94887 1054 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 NUDT17P0C025 328 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CDC42P60953 191 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 BST1Q10588 318 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 CELF6Q96J87 481 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 MIEF1Q9NQG6 463 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 BCLAF3A2AJT9 711 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 SHOX2O60902 331 aaPredicted RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 PABPC1P11940 636 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 MMP13P45452 471 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 DLG4P78352 724 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 TTC23Q5W5X9 447 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 ATP6V0D2Q8N8Y2 350 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 HTR3CQ8WXA8 447 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 PTCD3Q96EY7 689 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 SP140LQ9H930 580 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 TBC1D13Q9NVG8 400 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 RPL26L1Q9UNX3 145 aaKnown RBP16.4■□□□□ 0.22
SHANK1-204ENST00000391814 PRKCQQ04759 706 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 MGAT5BQ3V5L5 792 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 STX12Q86Y82 276 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 C10orf107Q8IVU9 208 aa16.4■□□□□ 0.22
SHANK1-204ENST00000391814 MASTLQ96GX5 879 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms