RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ALYREFQ86V81 257 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 ADHFE1Q8IWW8 467 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 SNX31Q8N9S9 440 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 RBM15BQ8NDT2 890 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 ZSWIM2Q8NEG5 633 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 MAGEE2Q8TD90 523 aaPredicted RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 SHC3Q92529 594 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 RTKNQ9BST9 563 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 NMUR2Q9GZQ4 415 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 IL17RBQ9NRM6 502 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 UBQLN1Q9UMX0 589 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 MT-CO1P00395 513 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 RPL22P35268 128 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 GRIA3P42263 894 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 RXRGP48443 463 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 USP46P62068 366 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 FOPNLQ96NB1 174 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 HSD3B7Q9H2F3 369 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 HPS4Q9NQG7 708 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 VPS45Q9NRW7 570 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 TRHDEQ9UKU6 1024 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 H3BRB1 525 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 ANXA6P08133 673 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 SNRPB2P08579 225 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 IMPDH2P12268 514 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 FGFR3P22607 806 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 GRIK1P39086 918 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 MAD2L1Q13257 205 aaPredicted RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 CATSPERGQ6ZRH7 1159 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 FAM126BQ8IXS8 530 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 POC5Q8NA72 575 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 TUT1Q9H6E5 874 aaKnown RBP20.03■□□□□ 0.8
SHANK1-203ENST00000391813 XPNPEP3Q9NQH7 507 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 C3orf18Q9UK00 162 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 KLHL20Q9Y2M5 609 aa20.03■□□□□ 0.8
SHANK1-203ENST00000391813 MON2Q7Z3U7 1717 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 SLITRK3O94933 977 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 GABRB2P47870 512 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 TMEM62Q0P6H9 643 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 UBAP2LQ14157 1087 aaKnown RBP20.02■□□□□ 0.8
SHANK1-203ENST00000391813 SQLEQ14534 574 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 SLC4A5Q9BY07 1137 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 CDH9Q9ULB4 789 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 ATRNO75882 1429 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 SLC15A5A6NIM6 579 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 F8W810 466 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 JCHAINP01591 159 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 KHDC1Q4VXA5 237 aaKnown RBP20.02■□□□□ 0.8
SHANK1-203ENST00000391813 BBS12Q6ZW61 710 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 ZDHHC17Q8IUH5 632 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 FLCNQ8NFG4 579 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 ACTRT2Q8TDY3 377 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 TMEM165Q9HC07 324 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 LIMD1Q9UGP4 676 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 RAP2CQ9Y3L5 183 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 FARP1Q9Y4F1 1045 aaPredicted RBP20.02■□□□□ 0.8
SHANK1-203ENST00000391813 CCDC154A6NI56 674 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 TPP1O14773 563 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 NBNO60934 754 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 NR6A1Q15406 480 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 KLHL12Q53G59 568 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 PPP1R15BQ5SWA1 713 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 FIG4Q92562 907 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 TTYH3Q9C0H2 523 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 ARIH1Q9Y4X5 557 aaPredicted RBP20.02■□□□□ 0.8
SHANK1-203ENST00000391813 IPPQ9Y573 584 aa20.02■□□□□ 0.8
SHANK1-203ENST00000391813 CABYRO75952 493 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 MIPP30301 263 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 NEK3P51956 506 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 MPZL3Q6UWV2 235 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 AADATQ8N5Z0 425 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 GLIS3Q8NEA6 775 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 TMEM169Q96HH4 297 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 C7orf26Q96N11 449 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 APOL2Q9BQE5 337 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 ETNK2Q9NVF9 386 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 DNAJB4Q9UDY4 337 aa20.02■□□□□ 0.79
SHANK1-203ENST00000391813 ERI2A8K979 691 aaKnown RBP20.01■□□□□ 0.79
SHANK1-203ENST00000391813 ATP6V1G1O75348 118 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 ZNF12P17014 697 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 NAGLUP54802 743 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 BLVRAP53004 296 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 BNC1Q01954 994 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 YAF2Q8IY57 180 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 PHF21BQ96EK2 531 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 APOL5Q9BWW9 433 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 PRRG3Q9BZD7 231 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 MTF2Q9Y483 593 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-203ENST00000391813 RIC1Q4ADV7 1423 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 CAPN8A6NHC0 703 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 F8VP50 259 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 TRAFD1O14545 582 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-203ENST00000391813 RECQL5O94762 991 aaPredicted RBP20.01■□□□□ 0.79
SHANK1-203ENST00000391813 MAMLD1Q13495 774 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 PGM5Q15124 567 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 ANKS6Q68DC2 871 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 RINLQ6ZS11 566 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 POLNQ7Z5Q5 900 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 FAM131BQ86XD5 332 aa20.01■□□□□ 0.79
SHANK1-203ENST00000391813 POP5Q969H6 163 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms