RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 OPTNQ96CV9 577 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 TMA16Q96EY4 203 aaKnown RBP21.42■■□□□ 1.02
COL23A1-201ENST00000390654 NDNQ99608 321 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 NMRAL1Q9HBL8 299 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 ZNF638Q14966 1978 aaKnown RBP21.42■■□□□ 1.02
COL23A1-201ENST00000390654 ZBTB24O43167 697 aaPredicted RBP21.42■■□□□ 1.02
COL23A1-201ENST00000390654 TRPA1O75762 1119 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 PIK3R1P27986 724 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 MTTPP55157 894 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 CDK18Q07002 472 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 LAMB3Q13751 1172 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 LSM12Q3MHD2 195 aaKnown RBP21.42■■□□□ 1.02
COL23A1-201ENST00000390654 C4orf22Q6V702 233 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 CATSPER4Q7RTX7 472 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.42■■□□□ 1.02
COL23A1-201ENST00000390654 URGCPQ8TCY9 931 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 ZFAND2BQ8WV99 257 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 RBBP8Q99708 897 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 C11orf84Q9BUA3 381 aaPredicted RBP21.42■■□□□ 1.02
COL23A1-201ENST00000390654 CDY2AQ9Y6F7 541 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 CDY1Q9Y6F8 540 aa21.42■■□□□ 1.02
COL23A1-201ENST00000390654 EEF2KO00418 725 aaKnown RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 SPRP35270 261 aaPredicted RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 ARHGAP1Q07960 439 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 IL31Q6EBC2 164 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 TMC7Q7Z402 723 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 CCNYL1Q8N7R7 359 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 ANKRD52Q8NB46 1076 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 CENPIQ92674 756 aaPredicted RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 DCUN1D1Q96GG9 259 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 APBA2Q99767 749 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 EPAS1Q99814 870 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 ANLNQ9NQW6 1124 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 H3BRB1 525 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 PIGNO95427 931 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 NELFEP18615 380 aaKnown RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 HNRNPDQ14103 355 aaKnown RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 FLOT2Q14254 428 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 CNGA3Q16281 694 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 FSCBQ5H9T9 825 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 KBTBD6Q86V97 674 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 LENG1Q96BZ8 264 aaPredicted RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 CELF6Q96J87 481 aaKnown RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 CPNE1Q99829 537 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 SNX25Q9H3E2 840 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 TUT1Q9H6E5 874 aaKnown RBP21.41■■□□□ 1.02
COL23A1-201ENST00000390654 PIGVQ9NUD9 493 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 UBAP1Q9NZ09 502 aa21.41■■□□□ 1.02
COL23A1-201ENST00000390654 TRIM13O60858 407 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 BCAT1P54687 386 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 MS4A2Q01362 244 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 ARL13AQ5H913 290 aaPredicted RBP21.4■■□□□ 1.02
COL23A1-201ENST00000390654 DSELQ8IZU8 1212 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 SLC7A14Q8TBB6 771 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 BFARQ9NZS9 450 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 MLNP12872 115 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 MATKP42679 507 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 GRIA4P48058 902 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 IREB2P48200 963 aaKnown RBP21.4■■□□□ 1.02
COL23A1-201ENST00000390654 CHN2P52757 468 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 C6orf52Q5T4I8 152 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 SPATA24Q86W54 205 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 RNF217Q8TC41 542 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 KBTBD7Q8WVZ9 684 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 hCG_2014768A0A024R1R8 64 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 ERCC2P18074 760 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 SERPINB8P50452 374 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 RPS6KA3P51812 740 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 GRM3Q14832 879 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 ANKRD20A4Q4UJ75 823 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 GRTP1Q5TC63 336 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 RPS27LQ71UM5 84 aaKnown RBP21.4■■□□□ 1.02
COL23A1-201ENST00000390654 NAT14Q8WUY8 206 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 KCTD4Q8WVF5 259 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 KCNK16Q96T55 309 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 NPAS2Q99743 824 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 SIKE1Q9BRV8 207 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 GRIP2Q9C0E4 1043 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 RNF39Q9H2S5 420 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 VCX3BQ9H321 246 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 SUDS3Q9H7L9 328 aaPredicted RBP21.4■■□□□ 1.02
COL23A1-201ENST00000390654 DDX18Q9NVP1 670 aaKnown RBP21.4■■□□□ 1.02
COL23A1-201ENST00000390654 ZDHHC2Q9UIJ5 367 aa21.4■■□□□ 1.02
COL23A1-201ENST00000390654 CITO14578 2027 aa21.39■■□□□ 1.02
COL23A1-201ENST00000390654 RECQL4O94761 1208 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 NMBRP28336 390 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 MPP3Q13368 585 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 PDK1Q15118 436 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 KCNMB4Q86W47 210 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 PQLC1Q8N2U9 271 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 BHLHE22Q8NFJ8 381 aaPredicted RBP21.39■■□□□ 1.01
COL23A1-201ENST00000390654 JADE3Q92613 823 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 LRGUKQ96M69 825 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 DMAP1Q9NPF5 467 aaPredicted RBP21.39■■□□□ 1.01
COL23A1-201ENST00000390654 PTPN3P26045 913 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 LIMK2P53671 638 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 VPS39Q96JC1 886 aa21.39■■□□□ 1.01
COL23A1-201ENST00000390654 ACE2Q9BYF1 805 aaPredicted RBP21.39■■□□□ 1.01
COL23A1-201ENST00000390654 ILKAPQ9H0C8 392 aaPredicted RBP21.39■■□□□ 1.01
COL23A1-201ENST00000390654 SEMA6AQ9H2E6 1030 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms