RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 RRM2BQ7LG56 351 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 RALYLQ86SE5 291 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SPPL2CQ8IUH8 684 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 WDR63Q8IWG1 891 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 RNF168Q8IYW5 571 aaPredicted RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SYCP3Q8IZU3 236 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 FBXL6Q8N531 539 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 AFAP1Q8N556 730 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 STPG3Q8N7X2 389 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 PLA2G15Q8NCC3 412 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SUN3Q8TAQ9 357 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 TSPAN17Q96FV3 270 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 FAM84AQ96KN4 292 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 KLHL15Q96M94 604 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 MFSD14AQ96MC6 490 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 UROC1Q96N76 676 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 MAP7D2Q96T17 732 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 VKORC1Q9BQB6 163 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SYT17Q9BSW7 474 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CCDC106Q9BWC9 280 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 REXO4Q9GZR2 422 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 KATNBL1Q9H079 304 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CHMP4BQ9H444 224 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 GSTO2Q9H4Y5 243 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SCPEP1Q9HB40 452 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 ZNF624Q9P2J8 865 aaPredicted RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CGNQ9P2M7 1197 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 DKK3Q9UBP4 350 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 ZFP69BQ9UJL9 534 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 LAMP5Q9UJQ1 280 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 CPSF3Q9UKF6 684 aaKnown RBP6.72□□□□□ -1.33
TRAV35-201ENST00000390462 PADI1Q9ULC6 663 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 NENFQ9UMX5 172 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 SRCAPQ6ZRS2 3230 aa6.72□□□□□ -1.33
TRAV35-201ENST00000390462 IQGAP1P46940 1657 aa6.71□□□□□ -1.33
TRAV35-201ENST00000390462 ABCC1P33527 1531 aa6.71□□□□□ -1.33
TRAV35-201ENST00000390462 ZMYM3Q14202 1370 aa6.71□□□□□ -1.33
TRAV35-201ENST00000390462 LRRIQ1Q96JM4 1722 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 RNF103-CHMP3A0A140T963 221 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 GXYLT2A0PJZ3 443 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 M0QYT0 321 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 RNF103O00237 685 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 CBFA2T3O75081 653 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 RTN2O75298 545 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 VPS4BO75351 444 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 BCAS2O75934 225 aaPredicted RBP6.71□□□□□ -1.34
TRAV35-201ENST00000390462 EFEMP2O95967 443 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 AMHP03971 560 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 HGFP14210 728 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 TYMPP19971 482 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 KCNA3P22001 575 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 YY1P25490 414 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 HSPA4P34932 840 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 THBS4P35443 961 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 CASP3P42574 277 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 KIR2DL3P43628 341 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 STAT5BP51692 787 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 TUBB4BP68371 445 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 NIPAL4Q0D2K0 466 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 TUBB3Q13509 450 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 PCOLCEQ15113 449 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 HYAL4Q2M3T9 481 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 DPCR1Q3MIW9 517 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 DCAF17Q5H9S7 520 aaPredicted RBP6.71□□□□□ -1.34
TRAV35-201ENST00000390462 RALGPS1Q5JS13 557 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 PHF19Q5T6S3 580 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 ETV3LQ6ZN32 361 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 TMEM110Q86TL2 294 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 FAM185AQ8N0U4 392 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 SPARTQ8N0X7 666 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 PHACTR3Q96KR7 559 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 PRAM1Q96QH2 718 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.71□□□□□ -1.34
TRAV35-201ENST00000390462 IMPG2Q9BZV3 1241 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 TNFRSF12AQ9NP84 129 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 NINJ2Q9NZG7 142 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 IL19Q9UHD0 177 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 CDC42EP3Q9UKI2 254 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 MTMR6Q9Y217 621 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 PIN4Q9Y237 131 aaKnown RBP6.71□□□□□ -1.34
TRAV35-201ENST00000390462 VWA7Q9Y334 891 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 KIF3AQ9Y496 699 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 ANGPTL3Q9Y5C1 460 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 PREX2Q70Z35 1606 aa6.71□□□□□ -1.34
TRAV35-201ENST00000390462 TCRBV21S2A2A0A5A6 115 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CXorf49A8MYA2 514 aaPredicted RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CTIFO43310 598 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 ATXN1LP0C7T5 689 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 SFTPCP11686 197 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 ERCC2P18074 760 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 KRT4P19013 534 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 CASTP20810 708 aaKnown RBP6.7□□□□□ -1.34
TRAV35-201ENST00000390462 ARL4AP40617 200 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 GSTM5P46439 218 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PCP4P48539 62 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 BMXP51813 675 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PGDP52209 483 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 ARFIP1P53367 373 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PMS2P54278 862 aa6.7□□□□□ -1.34
TRAV35-201ENST00000390462 PRKAG1P54619 331 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms