RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 CLTBP09497 229 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ERVK-10P10266 1014 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 PABPC1P11940 636 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 BCL2L1Q07817 233 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 TYW3Q6IPR3 259 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ZCCHC8Q6NZY4 707 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 SMAD5Q99717 465 aaKnown RBP16.32■□□□□ 0.2
COL2A1-202ENST00000380518 LRRC19Q9H756 370 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 ADPRHL2Q9NX46 363 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 VPS51Q9UID3 782 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 TNFSF13BQ9Y275 285 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 SNX8Q9Y5X2 465 aa16.32■□□□□ 0.2
COL2A1-202ENST00000380518 RGS14O43566 566 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ADRB2P07550 413 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ABHD2P08910 425 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 BMP6P22004 513 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 GUCA1AP43080 201 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 XRCC4Q13426 336 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 C15orf59Q2T9L4 293 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 IRGCQ6NXR0 463 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 AADACL2Q6P093 401 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 C16orf46Q6P387 395 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 DNAJC14Q6Y2X3 702 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 TMEM132CQ8N3T6 1108 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 KLHL25Q9H0H3 589 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ARMC7Q9H6L4 198 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 OR12D3Q9UGF7 316 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 AP3M1Q9Y2T2 418 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 TPRKBQ9Y3C4 175 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 TNPO3Q9Y5L0 923 aaKnown RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 A0A0B4J269 797 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 GLRA2P23416 452 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 NEK3P51956 506 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 AMPD2Q01433 879 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF544Q6NX49 715 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 DEFB132Q7Z7B7 95 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 TMEM161BQ8NDZ6 487 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 LNX1Q8TBB1 728 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 STARD8Q92502 1023 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 HGH1Q9BTY7 390 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 TPP1O14773 563 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 PARNO95453 639 aaKnown RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 C4BPBP20851 252 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ATN1P54259 1190 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 PLD1Q13393 1074 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ARMC12Q5T9G4 340 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 EXOC3L1Q86VI1 746 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 GPSM1Q86YR5 675 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 RORBQ92753 470 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 REPS1Q96D71 796 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 ZNF184Q99676 751 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 SAE1Q9UBE0 346 aaPredicted RBP16.31■□□□□ 0.2
COL2A1-202ENST00000380518 OPTCQ9UBM4 332 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 IQGAP1P46940 1657 aa16.31■□□□□ 0.2
COL2A1-202ENST00000380518 MEIS2O14770 477 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 PCDH8O95206 1070 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ANXA6P08133 673 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ABCB1P08183 1280 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 S100A3P33764 101 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 GPR15P49685 360 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 IL2P60568 153 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 SLC39A12Q504Y0 691 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 OR8H2Q8N162 312 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 BAP1Q92560 729 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 RNFT2Q96EX2 444 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ZSCAN32Q9NX65 697 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ITSN1Q15811 1721 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 TRIM71Q2Q1W2 868 aaKnown RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ALFQ53S48 1182 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ATAD3BQ5T9A4 648 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ZDHHC13Q8IUH4 622 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 PRELID2Q8N945 189 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 GAD1Q99259 594 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 CCDC3Q9BQI4 270 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 MRIQ9BWK5 157 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ACP6Q9NPH0 428 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 GTF2A1LQ9UNN4 478 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 PSMD12O00232 456 aaPredicted RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 EPHB6O15197 1021 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 PSMB4P28070 264 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 FMO4P31512 558 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 NAGLUP54802 743 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 RHBDL3P58872 404 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 CASP12Q6UXS9 341 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 HDDC2Q7Z4H3 204 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 YTHDF3Q7Z739 585 aaKnown RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ZCCHC7Q8N3Z6 543 aaKnown RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ALLCQ8N6M5 410 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 ITFG1Q8TB96 612 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 DEPDC7Q96QD5 511 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 MRPS26Q9BYN8 205 aaKnown RBP16.3■□□□□ 0.2
COL2A1-202ENST00000380518 MARCH2Q9P0N8 246 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 HS6ST1O60243 411 aa16.3■□□□□ 0.2
COL2A1-202ENST00000380518 RPL22P35268 128 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms