RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 IGSF8Q969P0 613 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF419Q96HQ0 510 aaPredicted RBP20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 SGSM3Q96HU1 749 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 IL12RB2Q99665 862 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 TMEM248Q9NWD8 314 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 SPG21Q9NZD8 308 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 FNIP2Q9P278 1114 aa20.29■□□□□ 0.84
PDLIM5-205ENST00000380180 MIA3Q5JRA6 1907 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 FAM159BA6NKW6 160 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 HMGA1P17096 107 aaKnown RBP20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 LAG3P18627 525 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 RPA3P35244 121 aaPredicted RBP20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 ATP5C1P36542 298 aaKnown RBP20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 KPNA1P52294 538 aaPredicted RBP20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 WDR4P57081 412 aaKnown RBP20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 CYS1Q717R9 158 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 CCNJLQ8IV13 435 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 LRRC34Q8IZ02 419 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF276Q8N554 614 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 OXNAD1Q96HP4 312 aaPredicted RBP20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 HERC2P3Q9BVR0 1158 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 CASS4Q9NQ75 786 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 HSFX1Q9UBD0 423 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 DNMT3LQ9UJW3 386 aa20.28■□□□□ 0.84
PDLIM5-205ENST00000380180 CACNG3O60359 315 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 UGT1A9O60656 530 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 ALDH1A2O94788 518 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 PGAM1P18669 254 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 CA4P22748 312 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 GBP2P32456 591 aaPredicted RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 KCNQ1P51787 676 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 NDST2P52849 883 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 PRPSAP1Q14558 356 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 SNX30Q5VWJ9 437 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 TIGD7Q6NT04 549 aaPredicted RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 NECAB2Q7Z6G3 386 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 LRRC49Q8IUZ0 686 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 UNC5BQ8IZJ1 945 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 TMEM199Q8N511 208 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 PDZD8Q8NEN9 1154 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 CDK5RAP1Q96SZ6 601 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 NAT9Q9BTE0 207 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 UGT1A7Q9HAW7 530 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 UGT1A10Q9HAW8 530 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 UGT1A8Q9HAW9 530 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 SSU72Q9NP77 194 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 IPO11Q9UI26 975 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF180Q9UJW8 692 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 GOLGA6L7A0A1B0GV03 622 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 ZNF840PA6NDX5 716 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 DRGXA6NNA5 263 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 GOLGA8RI6L899 631 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 EFCAB14O75071 495 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 MT-ND3P03897 115 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 VIMP08670 466 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 CSH1P0DML2 217 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 CSH2P0DML3 217 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 TTC39BQ5VTQ0 682 aaPredicted RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 NADSYN1Q6IA69 706 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 OTOP2Q7RTS6 562 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 DDX53Q86TM3 631 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 DNAAF3Q8N9W5 541 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 AUTS2Q8WXX7 1259 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 OVCA2Q8WZ82 227 aa20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 KLF6Q99612 283 aaPredicted RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 HBS1LQ9Y450 684 aaKnown RBP20.27■□□□□ 0.84
PDLIM5-205ENST00000380180 CHD5Q8TDI0 1954 aa20.27■□□□□ 0.83
PDLIM5-205ENST00000380180 GJB5O95377 273 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 ASMTLO95671 621 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 ALDH1A3P47895 512 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 SPATA22Q8NHS9 363 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 SERAC1Q96JX3 654 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 RPRD1AQ96P16 312 aaPredicted RBP20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 YME1L1Q96TA2 773 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 PAIP2Q9BPZ3 127 aaKnown RBP20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 APOL2Q9BQE5 337 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 LRRC40Q9H9A6 602 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 RBM22Q9NW64 420 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 DONSONQ9NYP3 566 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 BFARQ9NZS9 450 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 URODP06132 367 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 DNAJB2P25686 324 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 RAB33AQ14088 237 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 CRYMQ14894 314 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 ACBD5Q5T8D3 534 aaPredicted RBP20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 CHSY1Q86X52 802 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 TTC17Q96AE7 1141 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 MYEOVQ96EZ4 313 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 MYRFLQ96LU7 910 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 FCRL5Q96RD9 977 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 NACA2Q9H009 215 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 GLOD4Q9HC38 313 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 SAMD15Q9P1V8 674 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 YIPF1Q9Y548 306 aa20.26■□□□□ 0.83
PDLIM5-205ENST00000380180 TCP11X1B4DZS4 312 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 PSMD3O43242 534 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 POLBP06746 335 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 IL9RQ01113 521 aa20.25■□□□□ 0.83
PDLIM5-205ENST00000380180 SLC1A5Q15758 541 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms