RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 MAGEA6P43360 314 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 ITGA8P53708 1063 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 PLTPP55058 493 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 YBEYP58557 167 aaPredicted RBP12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 RPS24P62847 133 aaKnown RBP12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CAV1Q03135 178 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 AP1B1Q10567 949 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CALCOCO2Q13137 446 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 ADAM15Q13444 863 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 HLTFQ14527 1009 aaKnown RBP eCLIP12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CTC1Q2NKJ3 1217 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 PARP15Q460N3 678 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 IZUMO3Q5VZ72 239 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 ARHGAP36Q6ZRI8 547 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 BBS7Q8IWZ6 715 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 CFAP52Q8N1V2 620 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 ATPAF2Q8N5M1 289 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 KIAA1958Q8N8K9 716 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 SH3RF2Q8TEC5 729 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 LRRC45Q96CN5 670 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 ZSWIM3Q96MP5 696 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 SPATA13Q96N96 652 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 FMO2Q99518 471 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 SMG9Q9H0W8 520 aaKnown RBP12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 PLSCR2Q9NRY7 297 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 FAM153AQ9UHL3 310 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 SHOC2Q9UQ13 582 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 TBC1D30Q9Y2I9 924 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 SH3BP1Q9Y3L3 701 aa12.28□□□□□ -0.44
EXOSC9-202ENST00000379663 RASA4BC9J798 803 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 RNF103O00237 685 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 DFFAO00273 331 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 RASA4O43374 803 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 OPHN1O60890 802 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 RAMP2O60895 175 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 PEX11BO96011 259 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 HOXB8P17481 243 aaPredicted RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 PTPN3P26045 913 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 OR1E1P30953 314 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 CHKAP35790 457 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 IFI35P80217 286 aaPredicted RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 KCNJ11Q14654 390 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 MORF4L2Q15014 288 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 ANKRD20A2Q5SQ80 823 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 RARS2Q5T160 578 aaKnown RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 MPP7Q5T2T1 576 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 ANKRD20A1Q5TYW2 823 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 ANKRD20A3Q5VUR7 823 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 CXorf57Q6NSI4 855 aaKnown RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 HOOK3Q86VS8 718 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 NPAS3Q8IXF0 933 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 ZNF567Q8N184 647 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 MREGQ8N565 214 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 NAT8LQ8N9F0 302 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 HJURPQ8NCD3 748 aaPredicted RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 CCNYQ8ND76 341 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 OR52K2Q8NGK3 314 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 CCDC110Q8TBZ0 833 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 CPT1BQ92523 772 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 MAML1Q92585 1016 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 HMCESQ96FZ2 354 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 ZNF419Q96HQ0 510 aaPredicted RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 VAT1Q99536 393 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 TXLNGYQ9BZA5 131 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 IGFLR1Q9H665 355 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 KIF9Q9HAQ2 790 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 ZNF446Q9NWS9 450 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 CLEC1BQ9P126 229 aa12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 TPX2Q9ULW0 747 aaKnown RBP12.27□□□□□ -0.44
EXOSC9-202ENST00000379663 KCNK1O00180 336 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 SMAPO00193 183 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 TRDMT1O14717 391 aaKnown RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 SCAMP3O14828 347 aaKnown RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 TBX10O75333 385 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 ACTN2P35609 894 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 PAPOLAP51003 745 aaKnown RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 ZBTB17Q13105 803 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 TIGD7Q6NT04 549 aaPredicted RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 PCGF5Q86SE9 256 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 SETD3Q86TU7 594 aaPredicted RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 ARID3BQ8IVW6 561 aaPredicted RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 PPIL6Q8IXY8 311 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 ING5Q8WYH8 240 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 PRCCQ92733 491 aaPredicted RBP12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 IL12RB2Q99665 862 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 FERMT1Q9BQL6 677 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 PHACTR1Q9C0D0 580 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 MAGEH1Q9H213 219 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 IGSF9Q9P2J2 1179 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 MTCH2Q9Y6C9 303 aa12.27□□□□□ -0.45
EXOSC9-202ENST00000379663 MUC22E2RYF6 1773 aaPredicted RBP12.26□□□□□ -0.45
EXOSC9-202ENST00000379663 ILVBLA1L0T0 632 aa12.26□□□□□ -0.45
EXOSC9-202ENST00000379663 ARHGAP42A6NI28 874 aa12.26□□□□□ -0.45
EXOSC9-202ENST00000379663 MATN3O15232 486 aa12.26□□□□□ -0.45
EXOSC9-202ENST00000379663 CHADO15335 359 aa12.26□□□□□ -0.45
EXOSC9-202ENST00000379663 CACNG3O60359 315 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms