RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 MANEALQ5VSG8 457 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 ATG16L1Q676U5 607 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 KCTD11Q693B1 232 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 NAPEPLDQ6IQ20 393 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 ZNF280DQ6N043 979 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 TIGD7Q6NT04 549 aaPredicted RBP10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 PACS1Q6VY07 963 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 KYAT3Q6YP21 454 aaKnown RBP10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC39A5Q6ZMH5 540 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 LRRC8DQ7L1W4 858 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 PACS2Q86VP3 889 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 ZNF280BQ86YH2 543 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 NUP93Q8N1F7 819 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 C10orf82Q8WW14 230 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 CPNE1Q99829 537 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 TSSK1BQ9BXA7 367 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 TRIM55Q9BYV6 548 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 TRPV6Q9H1D0 765 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SLC40A1Q9NP59 571 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 TXLNGQ9NUQ3 528 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 SYBUQ9NX95 663 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 PRKAG2Q9UGJ0 569 aa10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 AAR2Q9Y312 384 aaKnown RBP10.71□□□□□ -0.69
POLR2J3-201ENST00000379340 TMEM265A0A087WTH1 108 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM237BA0A1B0GVD1 139 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ARHGAP42A6NI28 874 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 KCNK1O00180 336 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ZBTB24O43167 697 aaPredicted RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 HOXA2O43364 376 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 CACNG3O60359 315 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 GLRA3O75311 464 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 PAGE1O75459 146 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 TADA2AO75478 443 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 USP1O94782 785 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 AMHP03971 560 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 NEFHP12036 1026 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 NFKB1P19838 968 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 GP5P40197 560 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 PSEN1P49768 467 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 NCALDP61601 193 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 CDK18Q07002 472 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ELAVL2Q12926 359 aaKnown RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 MTA1Q13330 715 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 INSCQ1MX18 579 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 FAM133BQ5BKY9 247 aaKnown RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 GRTP1Q5TC63 336 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 CCDC91Q7Z6B0 441 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 SCD5Q86SK9 330 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 CCDC117Q8IWD4 279 aaPredicted RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 SCN4BQ8IWT1 228 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 HOMEZQ8IX15 550 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ABI1Q8IZP0 508 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ATPAF2Q8N5M1 289 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 SCAMP5Q8TAC9 235 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 SPOCK2Q92563 424 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ATP2A3Q93084 1043 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 CERS2Q96G23 380 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 C1orf74Q96LT6 269 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 RMDN2Q96LZ7 410 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 CEP41Q9BYV8 373 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 IL22Q9GZX6 179 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ECT2Q9H8V3 914 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 SLCO1B3Q9NPD5 702 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 OLA1Q9NTK5 396 aaKnown RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 NSMCE4AQ9NXX6 385 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 ZFATQ9P243 1243 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 TXNDC16Q9P2K2 825 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 VANGL2Q9ULK5 521 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 NEU3Q9UQ49 428 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 TLR6Q9Y2C9 796 aa10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 MYO18AQ92614 2054 aaKnown RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
POLR2J3-201ENST00000379340 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 KCNU1A8MYU2 1149 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 HNRNPCL1O60812 293 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ANXA9O76027 345 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 RTN3O95197 1032 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CCNB1P14635 433 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CD68P34810 354 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CDH17Q12864 832 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ZBTB17Q13105 803 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 MRPL58Q14197 206 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 ANO4Q32M45 955 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 RWDD4Q6NW29 188 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 TMEM135Q86UB9 458 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 RASSF3Q86WH2 238 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 TP53INP2Q8IXH6 220 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 NDUFAF2Q8N183 169 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 FITM2Q8N6M3 262 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 DNAAF3Q8N9W5 541 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 OR52K1Q8NGK4 314 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 C2orf15Q8WU43 125 aaKnown RBP10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 CASP10Q92851 521 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 FATE1Q969F0 183 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 C7orf26Q96N11 449 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 LRRC37BQ96QE4 947 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 IL12RB2Q99665 862 aa10.69□□□□□ -0.7
POLR2J3-201ENST00000379340 GORASP1Q9BQQ3 440 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms