RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 STARD3Q14849 445 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 TXNRD3NBQ6F5E7 133 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 SERPINA13PQ6UXR4 307 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 MAP7D3Q8IWC1 876 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 UMODL1-AS1Q8N2C9 162 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 PRSS33Q8NF86 280 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 CYB5D2Q8WUJ1 264 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 NELL1Q92832 810 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 PDLIM2Q96JY6 352 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 MRGPRX3Q96LB0 322 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 LACRTQ9GZZ8 138 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 TMEM245Q9H330 911 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 PCDH18Q9HCL0 1135 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 C2orf42Q9NWW7 574 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 CACNA2D2Q9NY47 1150 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
CKAP2-202ENST00000378034 DNAI1Q9UI46 699 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 SLC25A13Q9UJS0 675 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 TFR2Q9UP52 801 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
CKAP2-202ENST00000378034 CHD5Q8TDI0 1954 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 CACNA1IQ9P0X4 2223 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 ZBTB24O43167 697 aaPredicted RBP13.57□□□□□ -0.24
CKAP2-202ENST00000378034 BUB1BO60566 1050 aaPredicted RBP13.57□□□□□ -0.24
CKAP2-202ENST00000378034 SP9P0CG40 484 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 CCZ1BP86790 482 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
CKAP2-202ENST00000378034 DPYSQ14117 519 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 KRT81Q14533 505 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 TMEM92Q6UXU6 159 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 RHOT1Q8IXI2 618 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 LZTR1Q8N653 840 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 KCTD6Q8NC69 237 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 TSTD1Q8NFU3 115 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 TPCN2Q8NHX9 752 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 TSC1Q92574 1164 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 DESI2Q9BSY9 194 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 ACE2Q9BYF1 805 aaPredicted RBP13.57□□□□□ -0.24
CKAP2-202ENST00000378034 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 ZDHHC4Q9NPG8 344 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 EBF1Q9UH73 591 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 ALG6Q9Y672 507 aa13.57□□□□□ -0.24
CKAP2-202ENST00000378034 A0A0D9SEW6 157 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 A0A1W2PQF6 199 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 SPOPO43791 374 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 SYNCRIPO60506 623 aaKnown RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ERCC2P18074 760 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 COMTP21964 271 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ARSEP51690 589 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 NDST2P52849 883 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 NAP1L1P55209 391 aaKnown RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 CDH6P55285 790 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 SLC20A2Q08357 652 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 TCF15Q12870 199 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 POLD3Q15054 466 aaPredicted RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 PARP15Q460N3 678 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 RETSATQ6NUM9 610 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 VSIG1Q86XK7 387 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 CPNE8Q86YQ8 564 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ARHGEF2Q92974 986 aaKnown RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 MYO19Q96H55 970 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 CSPG4P5Q96PW8 444 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 PSMB7Q99436 277 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 FBRSQ9HAH7 460 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ATP13A1Q9HD20 1204 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 NDFIP2Q9NV92 336 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 DDX56Q9NY93 547 aaKnown RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 SALL4Q9UJQ4 1053 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 HPCAL4Q9UM19 191 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ZNF487B1APH4 448 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 WASH3PC4AMC7 463 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 PSTPIP1O43586 416 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 PRKCHP24723 683 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 WASP42768 502 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 CTSOP43234 321 aaPredicted RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 GEMIN4P57678 1058 aaKnown RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 IL31Q6EBC2 164 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ZNF662Q6ZS27 426 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 LONP2Q86WA8 852 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 RASSF3Q86WH2 238 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 RNF10Q8N5U6 811 aaKnown RBP13.56□□□□□ -0.24
CKAP2-202ENST00000378034 OR7D4Q8NG98 312 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 HHIPQ96QV1 700 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ZNF670Q9BS34 389 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 SPON2Q9BUD6 331 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 CD248Q9HCU0 757 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 ZSCAN32Q9NX65 697 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 VPS51Q9UID3 782 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 HS3ST2Q9Y278 367 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 DUSP10Q9Y6W6 482 aa13.56□□□□□ -0.24
CKAP2-202ENST00000378034 CKAP5Q14008 2032 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 TARSL2A2RTX5 802 aaKnown RBP13.55□□□□□ -0.24
CKAP2-202ENST00000378034 ZSCAN5CA6NGD5 496 aaPredicted RBP13.55□□□□□ -0.24
CKAP2-202ENST00000378034 BUB1O43683 1085 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 KRT86O43790 486 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 ATP9BO43861 1147 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 EPHX1P07099 455 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 CCDC175P0C221 793 aa13.55□□□□□ -0.24
CKAP2-202ENST00000378034 CLCN6P51797 869 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms