RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 BST2Q10589 180 aaKnown RBP12.75□□□□□ -0.37
VRK3-202ENST00000377011 MAMLD1Q13495 774 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 ITPRIPL2Q3MIP1 535 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 CYB5D1Q6P9G0 228 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 PPP1R21Q6ZMI0 780 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 ZNF852Q6ZMS4 543 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 BBS7Q8IWZ6 715 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 RCOR2Q8IZ40 523 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 TTC39CQ8N584 583 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 EDEM1Q92611 657 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 PIWIL1Q96J94 861 aaKnown RBP12.75□□□□□ -0.37
VRK3-202ENST00000377011 TTC25Q96NG3 672 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 OSBPL8Q9BZF1 889 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 PHACTR1Q9C0D0 580 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 FBXO44Q9H4M3 255 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 KIF9Q9HAQ2 790 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 LMAN1LQ9HAT1 526 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 CYLDQ9NQC7 956 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 NINJ2Q9NZG7 142 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
VRK3-202ENST00000377011 SNX3O60493 162 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 KLKB1P03952 638 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 CYP17A1P05093 508 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 CALB1P05937 261 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 VIMP08670 466 aaKnown RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 RALAP11233 206 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 TCF3P15923 654 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 GNA15P30679 374 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 GPD2P43304 727 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 SLC6A11P48066 632 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 PPP3CCP48454 512 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 GALK1P51570 392 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 SLC18A1P54219 525 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 YWHAEP62258 255 aaKnown RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 MTAPQ13126 283 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 PM20D1Q6GTS8 502 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 HIBCHQ6NVY1 386 aaPredicted RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 ARHGEF18Q6ZSZ5 1173 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 TRPM8Q7Z2W7 1104 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 TDRPQ86YL5 185 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 ADGRG2Q8IZP9 1017 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 ZCCHC9Q8N567 271 aaKnown RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 PDZD8Q8NEN9 1154 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 DYDC1Q8WWB3 177 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 CKAP2Q8WWK9 683 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 ZNF606Q8WXB4 792 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 CPA5Q8WXQ8 436 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 GRAMD1AQ96CP6 724 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 SHDQ96IW2 340 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 FAM124BQ9H5Z6 455 aaPredicted RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 TLR8Q9NR97 1041 aaKnown RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 COMMD8Q9NX08 183 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 TMEM120BA0PK00 339 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 MGRN1O60291 552 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 SUN1O94901 812 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 ACSL3O95573 720 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 EGFP01133 1207 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 FYNP06241 537 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 HMBSP08397 361 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 CHKAP35790 457 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 OPRD1P41143 372 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 SNX1Q13596 522 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 RASA2Q15283 850 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 ANGPT1Q15389 498 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 LONRF1Q17RB8 773 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 MIB1Q86YT6 1006 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 PASD1Q8IV76 773 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 CFAP57Q96MR6 1250 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 FRMD8P1Q9BZ68 369 aaPredicted RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 THG1LQ9NWX6 298 aaKnown RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 EURLQ9NYK6 297 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 ZMYM5Q9UJ78 669 aa12.74□□□□□ -0.37
VRK3-202ENST00000377011 DRG1Q9Y295 367 aaKnown RBP12.74□□□□□ -0.37
VRK3-202ENST00000377011 KIAA1549LQ6ZVL6 1849 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 TJP3O95049 919 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 ZBED1O96006 694 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 MMP8P22894 467 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 IFNAR2P48551 515 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 TUBP50607 506 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 DAOAP59103 153 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 YWHAGP61981 247 aaKnown RBP eCLIP12.73□□□□□ -0.37
VRK3-202ENST00000377011 EFEMP1Q12805 493 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 RIPK1Q13546 671 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 CCINQ13939 588 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 DHCR24Q15392 516 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 TAF5Q15542 800 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 C10orf120Q5SQS8 335 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
VRK3-202ENST00000377011 IZUMO3Q5VZ72 239 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 TMEM25Q86YD3 366 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 SCUBE3Q8IX30 993 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 ATG4AQ8WYN0 398 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 MAGEB18Q96M61 343 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 ELAC2Q9BQ52 826 aaKnown RBP12.73□□□□□ -0.37
VRK3-202ENST00000377011 C11orf70Q9BRQ4 267 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 HERPUD2Q9BSE4 406 aa12.73□□□□□ -0.37
VRK3-202ENST00000377011 TRIM7Q9C029 511 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms