RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 SPRP35270 261 aaPredicted RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 MGAT5Q09328 741 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 TMEM198Q66K66 360 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 DEFB107AQ8IZN7 70 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 OR52K2Q8NGK3 314 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 SLC35F5Q8WV83 523 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 AUTS2Q8WXX7 1259 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 COLEC11Q9BWP8 271 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 MUC3BQ9H195 1237 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 GPBP1L1Q9HC44 474 aaPredicted RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 ANLNQ9NQW6 1124 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 CIDEBQ9UHD4 219 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 SEC24DO94855 1032 aaPredicted RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 PNPLA4P41247 253 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDR1-227ENST00000376570 EIF1ADQ8N9N8 165 aaKnown RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 ICA1LQ8NDH6 482 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 RAB3IL1Q8TBN0 382 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 ZNF570Q96NI8 536 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 BCO2Q9BYV7 579 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 STARD7Q9NQZ5 370 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 SLC2A6Q9UGQ3 507 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 DSEQ9UL01 958 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 CCDC22O60826 627 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 PAGE1O75459 146 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 PFKMP08237 780 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 ITGA2BP08514 1039 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 ETS2P15036 469 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 SATB1Q01826 763 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 TRIP10Q15642 601 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 RNF220Q5VTB9 566 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 ESRP1Q6NXG1 681 aaKnown RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 ZNF280BQ86YH2 543 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 TTC30BQ8N4P2 665 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 PCDH20Q8N6Y1 951 aaKnown RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 MTG1Q9BT17 334 aaPredicted RBP11.91□□□□□ -0.5
DDR1-227ENST00000376570 TXLNGYQ9BZA5 131 aa11.91□□□□□ -0.5
DDR1-227ENST00000376570 GPR182O15218 404 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PEX1O43933 1283 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 HDCP19113 662 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 OR1E1P30953 314 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PTDSS1P48651 473 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 ITPRIPL1Q6GPH6 555 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 DIS3LQ8TF46 1054 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 SLC38A7Q9NVC3 462 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 GJD2Q9UKL4 321 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 TRPV2Q9Y5S1 764 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 TMEM233B4DJY2 109 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 UNC5CO95185 931 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 FGFR3P22607 806 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PTPN7P35236 360 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 FUT11Q495W5 492 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.9□□□□□ -0.5
DDR1-227ENST00000376570 RALGPS1Q5JS13 557 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 NCBP2-AS2Q69YL0 99 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PRSS55Q6UWB4 352 aaPredicted RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 CYP2R1Q6VVX0 501 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 ZNF598Q86UK7 904 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 URGCPQ8TCY9 931 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 SLC44A1Q8WWI5 657 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 GRAMD1AQ96CP6 724 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 CERS2Q96G23 380 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 SMOQ99835 787 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PAPOLBQ9NRJ5 636 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 NDFIP2Q9NV92 336 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 IPO11Q9UI26 975 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 KCNH4Q9UQ05 1017 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 NME7Q9Y5B8 376 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 MAST2Q6P0Q8 1798 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 COL11A2P13942 1736 aaPredicted RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 DPPA5A6NC42 116 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PRRG1O14668 218 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 CHRNGP07510 517 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 MPSTP25325 297 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 COG7P83436 770 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 SLC25A52Q3SY17 297 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 LRRC73Q5JTD7 316 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 SNX30Q5VWJ9 437 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PACS1Q6VY07 963 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 RIPOR1Q6ZS17 1223 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 TPGS1Q6ZTW0 290 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 FAM13CQ8NE31 585 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 GSTCDQ8NEC7 633 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 DQX1Q8TE96 717 aaKnown RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 SH3TC2Q8TF17 1288 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 DCAKDQ8WVC6 231 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 SMARCD1Q96GM5 515 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 APOL5Q9BWW9 433 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 BRD8Q9H0E9 1235 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.5
DDR1-227ENST00000376570 DNAJB4Q9UDY4 337 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 AURKCQ9UQB9 309 aa11.9□□□□□ -0.5
DDR1-227ENST00000376570 PIGNO95427 931 aa11.89□□□□□ -0.51
DDR1-227ENST00000376570 CCNB1P14635 433 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms