RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ANKRD20A4Q4UJ75 823 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TEDDM1Q5T9Z0 273 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SCIMPQ6UWF3 145 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RBM44Q6ZP01 1051 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GK5Q6ZS86 529 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BHMTQ93088 406 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ATP6V1E2Q96A05 226 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CCDC68Q9H2F9 335 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 UTP6Q9NYH9 597 aaKnown RBP14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 EURLQ9NYK6 297 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DSEQ9UL01 958 aa14.67□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SCAMP3O14828 347 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 HDCP19113 662 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CYP2B6P20813 491 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MPP1Q00013 466 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ITPRIPL1Q6GPH6 555 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MIB1Q86YT6 1006 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF786Q8N393 782 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OPTNQ96CV9 577 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF560Q96MR9 790 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZNF778Q96MU6 729 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RHOBTB2Q9BYZ6 727 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 UPF3AQ9H1J1 476 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 WDR41Q9HAD4 459 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ASB14A6NK59 587 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NFKBIEO00221 500 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TGDSO95455 350 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 POMCP01189 267 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PSEN1P49768 467 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ROR2Q01974 943 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GRM3Q14832 879 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MARK2Q7KZI7 788 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RIOX2Q8IUF8 465 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PHC3Q8NDX5 983 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CDCA5Q96FF9 252 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PCDHAC1Q9H158 963 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 FZD8Q9H461 694 aa14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 UBQLN1Q9UMX0 589 aaKnown RBP14.66□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GAS2O43903 313 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 STMN1P16949 149 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PIK3R1P27986 724 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LAMC2Q13753 1193 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SDHAF4Q5VUM1 108 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DCBLD1Q8N8Z6 715 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ZMAT2Q96NC0 199 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 EFCAB1Q9HAE3 211 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CPA4Q9UI42 421 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CDK5RAP2Q96SN8 1893 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 C15orf38-AP3S2A0A0A6YYH1 394 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 AHCYL1O43865 530 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NMBRP28336 390 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KLC3Q6P597 504 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PAOXQ6QHF9 649 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 C16orf89Q6UX73 402 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 ARPINQ7Z6K5 226 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GAD1Q99259 594 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 RBM22Q9NW64 420 aaKnown RBP eCLIP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 OR12D3Q9UGF7 316 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 EGFL7Q9UHF1 273 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 KIAA1257Q9ULG3 409 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 DLEC1Q9Y238 1755 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 PIGRP01833 764 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 HNRNPCP07910 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BDNFP23560 247 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 CTC1Q2NKJ3 1217 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LIN52Q52LA3 116 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 NOMO2Q5JPE7 1267 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BTBD8Q5XKL5 378 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 BLOC1S5Q8TDH9 187 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 LRRC39Q96DD0 335 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SLC39A3Q9BRY0 314 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 SLC4A5Q9BY07 1137 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MRPL46Q9H2W6 279 aaKnown RBP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 GBA2Q9HCG7 927 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 THEGQ9P2T0 379 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 MID2Q9UJV3 735 aa14.65□□□□□ -0.06
TNFRSF1B-201ENST00000376259 TTC24A2A3L6 582 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ERI2A8K979 691 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NR5A2O00482 541 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NOL3O60936 208 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ENDOD1O94919 500 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 XRCC1P18887 633 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 RPS12P25398 132 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 GRIK1P39086 918 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CHRNA4P43681 627 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 SLC5A9Q2M3M2 681 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FTHL17Q9BXU8 183 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 CDHR5Q9HBB8 845 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 BCLAF3A2AJT9 711 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 FAM149AA5PLN7 773 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 E7ESA3 106 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 HNRNPRO43390 633 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ARHGAP17Q68EM7 881 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 OLFML1Q6UWY5 402 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 MYO1HQ8N1T3 1032 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 ENDOVQ8N8Q3 282 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 NXNL1Q96CM4 212 aa14.64□□□□□ -0.07
TNFRSF1B-201ENST00000376259 TMEM79Q9BSE2 394 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms