RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 KLF10Q13118 480 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 CERCAMQ5T4B2 595 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 FOXB2Q5VYV0 432 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 PAQR9Q6ZVX9 377 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 ADAM32Q8TC27 787 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 KCTD13Q8WZ19 329 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 CDCA5Q96FF9 252 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 MED10Q9BTT4 135 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 EBF3Q9H4W6 596 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 NMRAL1Q9HBL8 299 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 CASS4Q9NQ75 786 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 ADAMTS6Q9UKP5 1117 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TMEM114B3SHH9 223 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 ZBTB14O43829 449 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 PRDX6P30041 224 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 SERPINB6P35237 376 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TKTL1P51854 596 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 HNRNPDQ14103 355 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 DUSP28Q4G0W2 176 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TCHHL1Q5QJ38 904 aaPredicted RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 METTL21CQ5VZV1 264 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 LPCAT4Q643R3 524 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 PDSS2Q86YH6 399 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TDRD5Q8NAT2 981 aaKnown RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 RNF169Q8NCN4 708 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 RNF217Q8TC41 542 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 AGR3Q8TD06 166 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 SLC2A13Q96QE2 648 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 TUBGCP5Q96RT8 1024 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 VCX3BQ9H321 246 aa14.86□□□□□ -0.03
MSH5-201ENST00000375703 C20orf96Q9NUD7 363 aaPredicted RBP14.86□□□□□ -0.03
MSH5-201ENST00000375703 MAGEB16A2A368 324 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 NCAM2O15394 837 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 KCNE1P15382 129 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 WARSP23381 471 aaKnown RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 MAP3K7CLP57077 242 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 TPI1P60174 286 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 MPP3Q13368 585 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 PCBP1Q15365 356 aaKnown RBP eCLIP14.85□□□□□ -0.038e-7■■■■□ 25
MSH5-201ENST00000375703 MAPK15Q8TD08 544 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 SLC9A7Q96T83 725 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 KLHL4Q9C0H6 718 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 CHRAC1Q9NRG0 131 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 NRP1O14786 923 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 TIMM44O43615 452 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 CAPN15O75808 1086 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 ZNF189O75820 626 aaPredicted RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 CYP2C9P11712 490 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 TPH1P17752 444 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 AXLP30530 894 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 NPY2RP49146 381 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 PPIDQ08752 370 aaKnown RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 CLEC20AQ6ZU45 233 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 CLEC14AQ86T13 490 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 DPP9Q86TI2 863 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 KCNMB4Q86W47 210 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 LENG8Q96PV6 779 aaPredicted RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 APOL2Q9BQE5 337 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 RTKNQ9BST9 563 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 ILKAPQ9H0C8 392 aaPredicted RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 IARS2Q9NSE4 1012 aaKnown RBP14.85□□□□□ -0.03
MSH5-201ENST00000375703 ZDHHC7Q9NXF8 308 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
MSH5-201ENST00000375703 KIF3CO14782 793 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 FYNP06241 537 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 HOXD8P13378 290 aaPredicted RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 CYP2B6P20813 491 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 YY1P25490 414 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 CALRP27797 417 aaKnown RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 CD68P34810 354 aaPredicted RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 POLE2P56282 527 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 SNAPC2Q13487 334 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 FRG1Q14331 258 aaKnown RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 SFT2D3Q587I9 215 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 KCTD11Q693B1 232 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 TOP6BLQ8N6T0 577 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 GDPD5Q8WTR4 605 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 OR52B2Q96RD2 323 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 GATA5Q9BWX5 397 aaPredicted RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 FAM192AQ9GZU8 254 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 TCF7L2Q9NQB0 619 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 ANLNQ9NQW6 1124 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 NRCAMQ92823 1304 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 ERI2A8K979 691 aaKnown RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 RNASEH1O60930 286 aaKnown RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 H2AFYO75367 372 aaKnown RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 GJA5P36382 358 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 RABGGTBP53611 331 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 AIF1P55008 147 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 XKR4Q5GH76 650 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 WSCD1Q658N2 575 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 ACVR1CQ8NER5 493 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 KCNK16Q96T55 309 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 MLPHQ9BV36 600 aaPredicted RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 ULBP1Q9BZM6 244 aa14.84□□□□□ -0.03
MSH5-201ENST00000375703 WDR6Q9NNW5 1121 aaKnown RBP14.84□□□□□ -0.03
MSH5-201ENST00000375703 OXSMQ9NWU1 459 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms