RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 GRIK4Q16099 956 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 SPRED3Q2MJR0 410 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 COPS5Q92905 334 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 CD101Q93033 1021 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 CDH19Q9H159 772 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 TBC1D13Q9NVG8 400 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
VARS-215ENST00000375663 CDH22Q9UJ99 828 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
VARS-215ENST00000375663 ZNF839A8K0R7 811 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 YDJCA8MPS7 323 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 C2P06681 752 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 CFHP08603 1231 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 NFKB1P19838 968 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 SERPINB1P30740 379 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 C10orf120Q5SQS8 335 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 TXNRD3NBQ6F5E7 133 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 TERB1Q8NA31 727 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 OR9Q1Q8NGQ5 310 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 COPG2Q9UBF2 871 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 VPS26AO75436 327 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 RECQL4O94761 1208 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 S100A5P33763 92 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 GRIA3P42263 894 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 CSE1LP55060 971 aaKnown RBP17.1■□□□□ 0.33
VARS-215ENST00000375663 VWA5B1Q5TIE3 1220 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 PIWIL4Q7Z3Z4 852 aaKnown RBP17.1■□□□□ 0.33
VARS-215ENST00000375663 SLC41A1Q8IVJ1 513 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 CLEC4DQ8WXI8 215 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 PPP1R10Q96QC0 940 aaKnown RBP17.1■□□□□ 0.33
VARS-215ENST00000375663 CCDC28BQ9BUN5 200 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 PRDM16Q9HAZ2 1276 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 PTPRHQ9HD43 1115 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 ABT1Q9ULW3 272 aaKnown RBP17.1■□□□□ 0.33
VARS-215ENST00000375663 VPS9D1Q9Y2B5 631 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 TSC22D4Q9Y3Q8 395 aa17.1■□□□□ 0.33
VARS-215ENST00000375663 SPDYE5A6NIY4 337 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 EVPLLA8MZ36 301 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 BCL10O95999 233 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 HIST1H2AGP0C0S8 130 aaPredicted RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 ERCC2P18074 760 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 HIST1H2ADP20671 130 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 RECQLP46063 649 aaPredicted RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 EML3Q32P44 896 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 MARC1Q5VT66 337 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 CATSPERGQ6ZRH7 1159 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 HIST1H2AHQ96KK5 128 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 HIST1H2AJQ99878 128 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 H2AFJQ9BTM1 129 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 BDH2Q9BUT1 245 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 XPR1Q9UBH6 696 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 HES2Q9Y543 173 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 TRIM38O00635 465 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 PAPSS1O43252 624 aaPredicted RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 LGR5O75473 907 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 MRPS15P82914 257 aaKnown RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 PRMT9Q6P2P2 845 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 AMIGO2Q86SJ2 522 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 CAMK1DQ8IU85 385 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 ANKRD52Q8NB46 1076 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 LMO3Q8TAP4 145 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 TBL1YQ9BQ87 522 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 C9orf16Q9BUW7 83 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 GPR63Q9BZJ6 419 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 TKTL2Q9H0I9 626 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 ATP11BQ9Y2G3 1177 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 SETD1AO15047 1707 aaKnown RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 C1orf232A0A0U1RR37 186 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 TADA2AO75478 443 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 CABYRO75952 493 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 LTFP02788 710 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 CETPP11597 493 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 TPSB2P20231 275 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 TPSAB1Q15661 275 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 PPM1JQ5JR12 505 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 LIPMQ5VYY2 423 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 SZRD1Q7Z422 152 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 DCP1BQ8IZD4 617 aaKnown RBP17.09■□□□□ 0.33
VARS-215ENST00000375663 RTKNQ9BST9 563 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 ELOVL4Q9GZR5 314 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 SDCBP2Q9H190 292 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 RGS18Q9NS28 235 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 SLIT2O94813 1529 aa17.09■□□□□ 0.33
VARS-215ENST00000375663 THP07101 528 aa17.08■□□□□ 0.33
VARS-215ENST00000375663 ATP5F1P24539 256 aaPredicted RBP17.08■□□□□ 0.33
VARS-215ENST00000375663 ATP1A4Q13733 1029 aa17.08■□□□□ 0.33
VARS-215ENST00000375663 ANO7Q6IWH7 933 aa17.08■□□□□ 0.33
VARS-215ENST00000375663 NAT8LQ8N9F0 302 aa17.08■□□□□ 0.33
VARS-215ENST00000375663 C7orf43Q8WVR3 580 aa17.08■□□□□ 0.33
VARS-215ENST00000375663 OR12D3Q9UGF7 316 aa17.08■□□□□ 0.33
VARS-215ENST00000375663 BCLAF3A2AJT9 711 aaKnown RBP17.08■□□□□ 0.32
VARS-215ENST00000375663 TMEM247A6NEH6 219 aa17.08■□□□□ 0.32
VARS-215ENST00000375663 VNN1O95497 513 aa17.08■□□□□ 0.32
VARS-215ENST00000375663 NRLP54845 237 aa17.08■□□□□ 0.32
VARS-215ENST00000375663 TRMT10BQ6PF06 316 aaKnown RBP17.08■□□□□ 0.32
VARS-215ENST00000375663 MIER2Q8N344 545 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms