RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 SYNCRIPO60506 623 aaKnown RBP16.38■□□□□ 0.21
C11orf88-202ENST00000375618 ZMPSTE24O75844 475 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 H2AFZP0C0S5 128 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 C7P10643 843 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 FECHP22830 423 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 OXCT1P55809 520 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 GNA12Q03113 381 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 STARD3Q14849 445 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 HNRNPA1L2Q32P51 320 aaKnown RBP16.38■□□□□ 0.21
C11orf88-202ENST00000375618 C9orf64Q5T6V5 341 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 LINGO4Q6UY18 593 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 H2AFVQ71UI9 128 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 TMPRSS6Q8IU80 811 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 NIPA2Q8N8Q9 360 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 OR2T3Q8NH03 318 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 ZNF564Q8TBZ8 553 aaPredicted RBP16.38■□□□□ 0.21
C11orf88-202ENST00000375618 PTPRN2Q92932 1015 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 DHX35Q9H5Z1 703 aaKnown RBP16.38■□□□□ 0.21
C11orf88-202ENST00000375618 USP18Q9UMW8 372 aa16.38■□□□□ 0.21
C11orf88-202ENST00000375618 IGHV1OR15-9A0A0B4J2B8 117 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 SMAD6O43541 496 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 RNF8O76064 485 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 TMEM253P0C7T8 217 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 EPHB2P29323 1055 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 PCK1P35558 622 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 AIF1P55008 147 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 RPS14P62263 151 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 SLC25A11Q02978 314 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 SMTNL2Q2TAL5 461 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 USP39Q53GS9 565 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 KCNT1Q5JUK3 1230 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 C6orf118Q5T5N4 469 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 ERMARDQ5T6L9 678 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 RTL3Q8N8U3 475 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 DCAF4L2Q8NA75 395 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 KDM1BQ8NB78 822 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 CTNNBL1Q8WYA6 563 aaPredicted RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 ZC3H10Q96K80 434 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 KLC2Q9H0B6 622 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 PRDM16Q9HAZ2 1276 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 USP36Q9P275 1121 aaKnown RBP16.37■□□□□ 0.21
C11orf88-202ENST00000375618 CTTNBP2NLQ9P2B4 639 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 IP6K2Q9UHH9 426 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 CYP8B1Q9UNU6 501 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 TFR2Q9UP52 801 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 PLXND1Q9Y4D7 1925 aa16.37■□□□□ 0.21
C11orf88-202ENST00000375618 ZFHX2Q9C0A1 2572 aaPredicted RBP16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SOWAHDA6NJG2 315 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 ATP9BO43861 1147 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 PRPSAP2O60256 369 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 CD160O95971 181 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SRCP12931 536 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 TGM1P22735 817 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 MAPKAPK2P49137 400 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 VASPP50552 380 aaPredicted RBP16.36■□□□□ 0.21
C11orf88-202ENST00000375618 ST8SIA6P61647 398 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 ARF5P84085 180 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SULT2A1Q06520 285 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 PIGHQ14442 188 aaPredicted RBP16.36■□□□□ 0.21
C11orf88-202ENST00000375618 E2F5Q15329 346 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 PMS2CLQ68D20 193 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 STK40Q8N2I9 435 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SH2D3CQ8N5H7 860 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 NETO2Q8NC67 525 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 ARHGEF2Q92974 986 aaKnown RBP16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SIPA1Q96FS4 1042 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 PANX2Q96RD6 677 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 FAM129BQ96TA1 746 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SPON2Q9BUD6 331 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 ACE2Q9BYF1 805 aaPredicted RBP16.36■□□□□ 0.21
C11orf88-202ENST00000375618 ZWILCHQ9H900 591 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 PARD6AQ9NPB6 346 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 MFHAS1Q9Y4C4 1052 aa16.36■□□□□ 0.21
C11orf88-202ENST00000375618 NYNRINQ9P2P1 1898 aaKnown RBP16.35■□□□□ 0.21
C11orf88-202ENST00000375618 CHD5Q8TDI0 1954 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 WASH4PA8MWX3 477 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 RNF103O00237 685 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 LCA5LO95447 670 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 RARAP10276 462 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 GOT1P17174 413 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 METAP1P53582 386 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 TAS2R40P59535 323 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 TPI1P60174 286 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ACAP1Q15027 740 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ATP13A4Q4VNC1 1196 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 LAIR1Q6GTX8 287 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ZNF783Q6ZMS7 281 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 Q6ZVU0 165 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ABCA7Q8IZY2 2146 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 DEFB119Q8N690 84 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 SPC24Q8NBT2 197 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 SLC35G2Q8TBE7 412 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 PRCCQ92733 491 aaPredicted RBP16.35■□□□□ 0.21
C11orf88-202ENST00000375618 EPAS1Q99814 870 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 RSPH9Q9H1X1 276 aaPredicted RBP16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ATP13A1Q9HD20 1204 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 ITM2CQ9NQX7 267 aa16.35■□□□□ 0.21
C11orf88-202ENST00000375618 CWC15Q9P013 229 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms