RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 CLUHO75153 1309 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 RGL2O15211 777 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 MTA2O94776 668 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 MYO1DO94832 1006 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 LINC00032P0C843 101 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 CCNB1P14635 433 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 TPP2P29144 1249 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-202ENST00000375340 CD86P42081 329 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 ATXN1P54253 815 aaKnown RBP6.66□□□□□ -1.34
SMC1A-202ENST00000375340 RTP1P59025 263 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 CRY2Q49AN0 593 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 ATP6AP1LQ52LC2 224 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 ACBD5Q5T8D3 534 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-202ENST00000375340 EEF1DP3Q658K8 133 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 ZPBP2Q6X784 338 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 DNAJC14Q6Y2X3 702 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-202ENST00000375340 CATSPERGQ6ZRH7 1159 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 UTS2BQ765I0 119 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 TMEM130Q8N3G9 435 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 DCUN1D1Q96GG9 259 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF512Q96ME7 567 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-202ENST00000375340 NFASCO94856 1347 aa6.66□□□□□ -1.34
SMC1A-202ENST00000375340 LINC00854A0A1B0GVQ3 168 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 SOAT2O75908 522 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 ASMTLO95671 621 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 PBLDP30039 288 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 CPT1AP50416 773 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 CTBP1Q13363 440 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 RIPK1Q13546 671 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 VGLL4Q14135 290 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 SPDYE7PQ495Y7 208 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TNIP2Q8NFZ5 429 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 ZNF112Q9UJU3 913 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 RECQL4O94761 1208 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 CRHR1P34998 444 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TMED10P49755 219 aaKnown RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 WDR4P57081 412 aaKnown RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 ZIK1Q3SY52 487 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 HS6ST3Q8IZP7 471 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TAGAPQ8N103 731 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TSPAN14Q8NG11 270 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 CLEC4CQ8WTT0 213 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 RPRD1AQ96P16 312 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 SYT15Q9BQS2 421 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 BRD8Q9H0E9 1235 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 RBM22Q9NW64 420 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 SEPT3Q9UH03 358 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 MFHAS1Q9Y4C4 1052 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 DOCK2Q92608 1830 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 ITM2AO43736 263 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 FBXO21O94952 628 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 SLC2A3P11169 496 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 UNGP13051 313 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 IDH3AP50213 366 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 KRT72Q14CN4 511 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 OTOP3Q7RTS5 596 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 LPPQ93052 612 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 DAPK2Q9UIK4 370 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 AP4S1Q9Y587 144 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 C15orf38-AP3S2A0A0A6YYH1 394 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 CAPN8A6NHC0 703 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 A8MX80 341 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 CCNT2O60583 730 aaKnown RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TSPAN3O60637 253 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 BDNFP23560 247 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TRIM60Q495X7 471 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TIGD7Q6NT04 549 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 ABHD15Q6UXT9 468 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 ARPINQ7Z6K5 226 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 SLC22A9Q8IVM8 553 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 LPCAT1Q8NF37 534 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 RNF145Q96MT1 663 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 PGLYRP2Q96PD5 576 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 EBF4Q9BQW3 602 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 FARP2O94887 1054 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 TOP3BO95985 862 aaKnown RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 GTF2A2P52657 109 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 KRT33BQ14525 404 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 PFKFB4Q16877 469 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 DCAKDQ8WVC6 231 aa6.65□□□□□ -1.34
SMC1A-202ENST00000375340 PDGFDQ9GZP0 370 aaPredicted RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 PAIP2BQ9ULR5 123 aaKnown RBP6.65□□□□□ -1.34
SMC1A-202ENST00000375340 HS6ST1O60243 411 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 DEAF1O75398 565 aaPredicted RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 CPSF4O95639 269 aaKnown RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SERPIND1P05546 499 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 CRABP2P29373 138 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 NEK2P51955 445 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 GTF2H3Q13889 308 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 MFSD14CQ5VZR4 134 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SCARA3Q6AZY7 606 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 SCIMPQ6UWF3 145 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 BNIPLQ7Z465 357 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 PSTKQ8IV42 348 aaKnown RBP6.65□□□□□ -1.35
SMC1A-202ENST00000375340 CCDC103Q8IW40 242 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 C12orf56Q8IXR9 622 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF398Q8TD17 642 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 RERGLQ9H628 205 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 POPDC2Q9HBU9 364 aa6.65□□□□□ -1.35
SMC1A-202ENST00000375340 DNAJC28Q9NX36 388 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms